Francisella opportunistica: CGC45_05940
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Entry
CGC45_05940 CDS
T06355
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
foo
Francisella opportunistica
Pathway
foo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CGC45_05940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
foo01007
]
CGC45_05940
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
foo03016
]
CGC45_05940
Enzymes [BR:
foo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CGC45_05940
Amino acid related enzymes [BR:
foo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CGC45_05940
Transfer RNA biogenesis [BR:
foo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CGC45_05940
Prokaryotic type
CGC45_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF5446
FapA
Sec10_N
CALCOCO1
Syntaxin
DUF2126
DUF6779
Spectrin
Uso1_p115_C
Prominin
DUF7040
NPV_P10
DUF3450
PCRF
IFT57
Motif
Other DBs
NCBI-ProteinID:
AXH33441
UniProt:
A0A345JS57
LinkDB
All DBs
Position
1212348..1213628
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AA seq
426 aa
AA seq
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MLDAKYIKDNLQQVAKKLATRGYQFDIAEFEAQELKRKQFQERTQELQSQRNTISKEIGQ
RKAKGEDTSNIFAKVNQINEELKAIEKELKELQDSINQMLLSMPNLPADDVPVGKDENDN
IEIRRWGTPREFHPEAPAKDHADIGEILKMIDFKAAAKITGSRFMVLKNKIAKLHRALSQ
FMLDMHTEKHGYEELYVPYLVNNDSLYGTGQLPKFAADLFKLEGDFAYSLIPTAEVPVTN
LVRDEILDTGSLPRYYTAHTPCFRSEAGSYGRDTKGMIRQHQFEKVELVHITTADKGEES
LELLTSHAEKVLQKLNLPYRVMKLCAGDMGFSAKKTYDLEVWLPSQNTYREISSCSWCGD
FQARRMKARHKNPSMKKPELVHTLNGSGLAVGRTLLAVIENYQQEDGSIMVPDALINYMG
GISVIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgctaaatatattaaggataatttacaacaagttgccaaaaagcttgcaact
agaggttatcagtttgatatagctgaatttgaagcccaagagctaaaaagaaaacagttt
caagaaaggactcaagaacttcagtctcagcgtaatactatttcaaaagaaataggtcaa
agaaaagctaaaggtgaagacactagtaatatatttgctaaagttaatcaaattaatgaa
gaactaaaggctattgaaaaagaacttaaagaactacaagattctataaatcaaatgcta
ctatcaatgccaaatctccctgctgatgatgtaccagttggcaaagatgagaatgataat
atagaaataagaagatggggaacaccacgtgagtttcatccagaagctccagcaaaagat
catgctgatattggtgaaatccttaagatgattgattttaaagctgcagctaaaattact
ggcagtcgctttatggtgctgaaaaataagattgctaaactacatcgtgctttatcacag
tttatgcttgatatgcatacagaaaaacatggttatgaagagttatatgtgccatatcta
gttaataatgatagtttatacggtactggacagttaccaaaatttgctgctgatcttttt
aagcttgagggagattttgcatatagcttaatacctacagcagaggtcccggtcactaat
ctagtaagggatgaaattttagatacaggatctttacctagatactatacagcgcatacg
ccttgctttagaagtgaggctggctcttatggacgtgatactaagggtatgattcgccaa
catcaatttgaaaaagttgaattagtacatatcactacagcagataaaggtgaagaatct
ctagaattgctcacatcgcatgctgaaaaagtcttacaaaagcttaacctaccatataga
gtgatgaagctatgtgctggtgatatgggttttagtgctaaaaaaacttatgacttagaa
gtttggctaccatcacaaaacacttatagagaaatatcttcgtgtagttggtgtggtgac
ttccaagcacgccgtatgaaagctcgacataaaaatccaagcatgaaaaaacctgaactt
gttcatacactaaatggttctggtttagcagttggtagaacacttttagcagttattgaa
aactaccagcaagaagatggatctatcatggttcctgatgctcttattaattatatgggt
ggaatttcagttattaaataa
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