Francisella opportunistica: CGC45_07885
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Entry
CGC45_07885 CDS
T06355
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
foo
Francisella opportunistica
Pathway
foo03420
Nucleotide excision repair
foo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGC45_07885 (uvrD)
03430 Mismatch repair
CGC45_07885 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foo03400
]
CGC45_07885 (uvrD)
Enzymes [BR:
foo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC45_07885 (uvrD)
DNA repair and recombination proteins [BR:
foo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC45_07885 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CGC45_07885 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
AXH33783
UniProt:
A0A345JT47
LinkDB
All DBs
Position
complement(1613702..1615924)
Genome browser
AA seq
740 aa
AA seq
DB search
MSSYDFLLGLNPQQQKATLLEDRNALILAGAGSGKTKVLTSRIAHLCRDKGVSVENILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVINSLDLDDKKYPPKLLQNFINKQKDKAILSNKLAKQYDTNFAHIYTAYEQRLQL
DNALDFADLLLHLYELFSLNQQHREYYQNKFKYILIDEFQDTNHVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAVVDNIHNYVKDLKNVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVELYCAVNERDEAKYIIDKIRQLHKDGVDYSDMAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEIKDTLAYLRIAATNSDNLAFERIINTPTRGIGNKTL
EIIRNYAQINSLSYWQATLDVIQKELVTKRTASLLLKFIKLINDISAQISQLSLDKLLEL
VINQSGLLASYQEKNSEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADETADSVQLMTIHASKGLEFCYVFLVAAEEGVFPPSSIVNSEEVFDNTNSKKMQ
DKLAEERRLFYVAITRAMKALTISYAQVRNIFGRSSFQVKSRFVAEIDSQHLNQDKLEFT
ATKHQTKQKANFGMSPFDFLKSNNTTNSFKPGDKVFHKVFGKGVFVKVQAQGAKEFYTVD
FGVDVGQKILLADIANLVKI
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttatgactttctcttaggcttaaatccacaacagcaaaaagcaacattacta
gaggatcgtaatgcgttgattcttgcaggtgctggtagtggtaaaacaaaagttctgaca
tcacgaatagcacatctttgtcgtgataaaggtgtatctgttgagaatattcttgctgta
acatttaccaataaagcagcaaaggagattcagcagcgcgttgaaaagatgcttgggatt
tctacatttggtatgtggataggtacttttcatggtatcgcacataggttattgcgtaag
catgcccatgaacttggtttggataaaaattttagaatacttgatcaagatgagcaagcc
cagttgattaaaaaagtaattaatagcctagatcttgatgataaaaagtatccccctaaa
ttattgcagaattttatcaataaacaaaaagataaagctatccttagtaataagcttgct
aagcaatatgatactaattttgctcatatttatactgcttatgaacaaagactccagctt
gataatgctttggattttgcagacttgcttttacatctttatgaacttttttctcttaac
cagcagcatagagaatattatcaaaacaaatttaaatatattttgatcgatgagtttcaa
gacactaaccatgttcaatacatgtggctaaagctacttgtaactgataataactatatg
atggcggttggagacgatgatcagtcaatatatggttggcgtggtgctgtcgtagataat
atccataactatgtaaaagatctcaaaaacgttgagattataaaactagagcaaaactat
cgttcaacaaaaaatatcctaaaagtagctaattcagtaatcaagaataatgataataga
atgtcaaaagagctgtggtcagcagctgaagatggcgaaaaggtagagctttattgtgct
gttaatgaacgtgatgaggcaaaatatattatagataaaattcgccagttacataaagac
ggtgttgattatagtgatatggctattttatatcgttcaaactacttatcgcgtgtctta
gaggaaagttgtatttatgcaagtattccatataggatttatggaggttttagattcttt
gatagggctgagattaaggatactttagcatatctaaggatagctgctacaaatagcgat
aacttagcatttgagagaattattaatacgccaacgcgcggaattggtaataaaacatta
gagataattagaaattatgcgcaaataaattcattatcatattggcaagctactttggat
gttatccaaaaagagcttgtaactaaaagaacagcaagtttacttttaaagtttattaaa
ctaattaatgatatttctgcacaaataagccaactcagtttagataaactcttagaatta
gtaataaatcaaagtggtcttttagcatcatatcaagaaaaaaatagtgaaaaggatcgt
caaaagattgataacttaaaagagttaataagtgctgctaaagattttgaaccacagatt
gagttgcttgatgataatactgatatattacaagattttttatcatttgctgttttagaa
gcgggtgaaatgcaagctgatgagactgcagatagtgttcagttaatgactattcatgcc
tcaaaaggtttagagttttgttatgtgtttttggttgctgcagaagagggtgtctttcca
ccaagttcaattgttaactctgaagaagtatttgacaatacaaactctaaaaaaatgcaa
gataagctcgctgaagaacgccgacttttttatgtggcaataacaagagctatgaaagcc
ttaactataagttatgcacaagtgcgcaatatctttggtcgtagtagttttcaagttaag
tcacgctttgttgcagagatagactctcagcatctgaatcaagataaactagaatttaca
gcaactaaacatcaaactaaacaaaaagcaaattttgggatgtcgccttttgattttctt
aaatcaaataatactactaatagctttaaaccaggtgataaagtatttcataaggttttt
ggcaaaggagtatttgtaaaagtacaagcacagggtgcaaaagagttttatactgtagat
tttggtgtcgatgtaggccaaaagatactactagcagatattgcaaatttagttaagatt
taa
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