Francisella opportunistica: CGC45_07935
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Entry
CGC45_07935 CDS
T06355
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
foo
Francisella opportunistica
Pathway
foo03030
DNA replication
foo03410
Base excision repair
foo03420
Nucleotide excision repair
foo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC45_07935
03410 Base excision repair
CGC45_07935
03420 Nucleotide excision repair
CGC45_07935
03440 Homologous recombination
CGC45_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
foo03032
]
CGC45_07935
03400 DNA repair and recombination proteins [BR:
foo03400
]
CGC45_07935
Enzymes [BR:
foo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC45_07935
DNA replication proteins [BR:
foo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC45_07935
DNA repair and recombination proteins [BR:
foo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGC45_07935
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC45_07935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
NYN_YacP
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AXH33793
UniProt:
A0A345JT57
LinkDB
All DBs
Position
complement(1625895..1628588)
Genome browser
AA seq
897 aa
AA seq
DB search
MKKIVLVDGSSYLFRAYHALPHLTNSQGEPTGAIIGVINMLKKLPIMYDTEYVAVVFDAK
GKNFRHQLYPQYKAHRKDMDDELRAQIQPLHQIIEKMGFPVIVEDGVEADDVIGTLAQNL
QKQGYQIIISTGDKDMAQLVTDNIVLYDSMKNITTDVAGVLEKYQISPHQMIDYLALMGD
STDNIPGIPKVGPKTAVKWLQEYQNIEGIIANQAQIKGKVGENLRNNIDLLKLSYQLATI
KCDLEFDLAVEDLKCKAADKAYLIKAYTRYEFKSLLKDLDDGAIKLVSSQAQAADITIEY
ITVTTQHQLEHLIAELNKSDGFAFDTETDSLNTYEANLIGLSFCAKEGQAFYIPLQHRYL
GVPQQLELGFVVDRLKPLFADPEKAKVAHNFKFDEKVLSKYAVEIDGQVNDTMIMAYVLK
SSGKHDMDSLSKEHLGIEPIAYTAIAGTGKQQQTLDQIDIEVVAKYAAEDADITFRLFNY
FRTLLKQDEVLYKLYSEIEMPLTIILNQMEKLGVKIDATKLIQQSASLAISIKELESKCY
NLAGQEFNLSSPLQLREILFGKLGLPPVKKTAKGQVSTSEEVLVQLAEDYEIAALLMKYR
HLSKLKNTYTDKLPKMLDANGRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSPEGRKIREA
FIAEDDYCIVAADYSQIELRIMAHLSKDNNLLKAFNQGLDIHSATAAEVLGISIDEVSSE
QRRRAKAINFGLIYGMSAFGLAKQLEIPRAEAQEYIDIYFNRYPSVKEYMFSAKEFAKQK
GYVETILGRRLYLPEINSKNVMQRNAAERAAINAPMQGTAADIIKKAMIEVNTMISQEYN
NEVKMVMQVHDELVFEVKRTKLEKVAAKIKVIMEAAVKLSVPLEVNVDAGENWDQAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattgttttagtcgatggctcttcatacctttttagagcctatcatgcctta
ccacatcttactaatagccaaggtgagcctacaggagcaattattggtgttatcaatatg
ctcaaaaaattgccaataatgtatgatacggaatatgttgcagttgtatttgatgcaaaa
ggtaagaattttcgtcatcaattatatccacaatataaagcacaccgtaaagatatggat
gatgagctaagagctcaaattcaaccgttgcatcagattattgagaaaatgggtttccct
gttattgtcgaagatggtgtcgaggctgatgatgtaataggcactctagcgcaaaacctt
caaaaacaaggttatcaaattatcatctctactggtgataaagatatggctcagttagtt
acagataatatagttttatatgattcaatgaaaaatatcaccacagatgttgcaggagta
ttagaaaaatatcaaattagcccacaccagatgatagattatctagcattaatgggagat
tcaacagacaatattccaggtattccaaaagttggacctaagactgctgttaaatggttg
caagaataccaaaatattgagggcataattgcaaatcaggcgcaaattaaagggaaagtt
ggcgagaacttacgtaataatattgatttgctgaaactatcttaccagttagcaacaatt
aaatgtgatcttgagtttgatttagctgtagaagatttaaaatgtaaagcagctgataaa
gcatatcttattaaagcttatacaagatatgagtttaaatctttattaaaagacttagat
gacggcgctattaagttagtatctagtcaagcgcaagccgctgatattactattgaatat
attactgttaccacacaacaccagctagagcatctaatcgcagaactaaataaatctgat
ggctttgcttttgatactgaaactgattctttaaatacctatgaagcaaacctaataggt
ttatctttttgcgctaaagaggggcaagctttttatatcccgttacaacatagatattta
ggagtaccacagcagctagaactaggttttgttgtggatagactaaagccactatttgca
gatcctgagaaagcaaaagtggcacataactttaaatttgatgaaaaagtgctatcaaaa
tatgcagttgagatagacggtcaagtcaatgatacgatgattatggcgtatgtgctaaaa
agtagtggtaagcatgatatggatagtctttctaaagaacatcttggtatagagccaatt
gcgtatactgcaatagccggtactggtaaacaacaacaaactttggatcagatagatatc
gaggttgttgctaaatatgctgctgaagatgctgatatcacatttaggctttttaactat
tttagaactttattaaagcaagatgaagttctttataaactttattctgagattgagatg
cctttgactattattcttaatcagatggaaaagttaggtgtaaagatagatgctactaag
cttatacagcagagtgctagtcttgcaatatctatcaaagagcttgaaagcaaatgttat
aatcttgctgggcaagagtttaatttatcttcgccattacaattaagagaaattcttttc
gggaagctgggacttcctccagttaaaaaaacagcaaagggacaagtatcaacttctgag
gaggtgttagttcaactagctgaagattatgaaatcgcagctttgttaatgaaatatcga
catttatcaaaacttaaaaatacatatacagataagctacctaagatgttagatgcaaac
ggtcgtgtgcatacttcatataaccaaacaggtacggtaacaggtagattatcttcttct
gatcctaatttacaaaatatacctataaaaagtcctgaagggcgtaaaattagagaggct
tttatagccgaagatgattattgtatagtcgctgcagattattcgcaaattgagcttaga
atcatggcacatctatcaaaagataacaatcttctcaaagcttttaatcaaggtttagat
atccatagtgcaacagctgctgaggttttaggtattagtatagatgaggttagcagtgaa
caaagaagaagagctaaagcaataaactttggtcttatctatgggatgagtgcttttgga
ttagctaaacagttggaaatacctcgagcagaagcacaagaatatattgatatatatttt
aatcgttatccaagtgttaaagagtatatgttttcagcaaaagagtttgctaagcaaaaa
ggctatgttgaaactatactaggtagaagattgtatctgccagaaattaactcaaaaaat
gtaatgcagcgtaacgctgcagagcgagcagcaattaatgcaccgatgcagggcacagct
gcggatattatcaaaaaagctatgatagaagttaatacgatgatttcccaggaatataat
aacgaggttaagatggtgatgcaggtacatgatgagcttgtttttgaagttaaaagaact
aagcttgaaaaggttgctgcaaagataaaagttataatggaggcggctgtaaagcttagt
gtgcctttagaagtaaatgttgatgctggtgaaaactgggatcaagctcattaa
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