Formosa sediminum: FNB79_00675
Help
Entry
FNB79_00675 CDS
T06103
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
fop
Formosa sediminum
Pathway
fop00541
Biosynthesis of various nucleotide sugars
fop01100
Metabolic pathways
fop01250
Biosynthesis of nucleotide sugars
Module
fop_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FNB79_00675
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fop01005
]
FNB79_00675
Enzymes [BR:
fop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FNB79_00675
Lipopolysaccharide biosynthesis proteins [BR:
fop01005
]
Lipid A
FNB79_00675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
Motif
Other DBs
NCBI-ProteinID:
QDO92556
UniProt:
A0A516GM03
LinkDB
All DBs
Position
142841..143659
Genome browser
AA seq
272 aa
AA seq
DB search
MNLSDVPQLKYIDADNFFLLSGPCAIEGEDMALRIAEKIVKITDDLQIPYIFKGSFKKAN
RSRIDSFTGIGDEKALKILKKVSDTFHIPTVTDIHEISDAAMAAEYVDVLQIPAFLVRQT
DLVVAAAQTGKVINLKKGQFMSPEAMKHAVQKVKDSGNDKAWITDRGTMFGYQDMIVDFR
GIPTMRQYAPTILDVTHSLQQPNQTSGVTGGRPDMIETIARAGIVNNVDGLFIETHFDPA
NAKSDGANMLHLDHLEGLLRHLVAIRKTVTAF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttcagatgttcctcaattaaaatatattgatgctgataatttcttcctactc
tctggcccttgtgcaattgaaggtgaagacatggcattacgtattgccgaaaaaatagtt
aaaatcactgacgatttacagattccttatatttttaaagggagttttaagaaagccaac
cgcagtagaattgatagttttacaggaattggtgatgaaaaagcacttaaaattttaaag
aaagtttcagacacatttcatattccaactgtaacagatattcatgaaatctctgatgca
gccatggctgcagaatatgtagatgtattacaaatccctgcatttttagttcgccaaaca
gatttagttgttgcggcagcccaaactggtaaagttataaacttaaaaaaaggacaattt
atgagtccagaggccatgaaacatgccgtacaaaaagtaaaagactctggaaacgataaa
gcttggattacagatcgaggaactatgtttggttaccaagatatgattgtagattttaga
ggtataccaaccatgcgccaatatgcgcctacaatattagatgtaacacattccctacaa
cagcctaaccaaactagtggtgtgacaggcggaagaccagatatgattgagaccattgct
agagctggtattgtaaacaatgtagatgggttatttattgaaacacatttcgatcctgca
aacgctaaaagtgatggcgcaaacatgttacatttagatcacctagaaggattattaagg
catttagttgcaattagaaaaactgtaactgctttttaa
DBGET
integrated database retrieval system
