Formosa sediminum: FNB79_01610
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Entry
FNB79_01610 CDS
T06103
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fop
Formosa sediminum
Pathway
fop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FNB79_01610 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fop01007
]
FNB79_01610 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fop03016
]
FNB79_01610 (lysS)
Enzymes [BR:
fop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FNB79_01610 (lysS)
Amino acid related enzymes [BR:
fop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FNB79_01610 (lysS)
Transfer RNA biogenesis [BR:
fop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FNB79_01610 (lysS)
Prokaryotic type
Other AARSs
FNB79_01610 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QDO92723
UniProt:
A0A516GMI9
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All DBs
Position
341402..343099
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AA seq
565 aa
AA seq
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MSQLSEQEIVRRDKLSKLRELGINPYPADLYPLTHTSKQVKADFQEGKTVIVAGRLMSRR
IQGNASFAEVQDSQGRIQVYFNRDEICSGEDKTKYNTVYKKLLDIGDFVGIEGELFTTKV
GEKTIMVKDFTILSKSLRPLPQPRVDTEGKVHDAFTDPEQRYRQRYADLVVNPHVKEVFV
KRTKLFNAMRGFFNDAGYFEVETPILQPIPGGAAARPFITHHNSLDIPLYMRIANELYLK
RLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFCEKLLEHCATAV
NGTTKAKFGEHEIDFKAPYARVTMADSIKDFTGFDITGKTEAEIRDAAKNMGIQVDDTMG
KGKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAY
SELNDPIDQRERFEHQLKLAQKGDDEATEFIDYDFLRALEYGMPPTSGMGIGMDRLIMFL
TNNQSIQEVLFFPQMRPEKKQVDMTEDEKAVFNILKTTSPIELNTLKTESQLSNKKWDKT
IKGLTKLGIAKVDKTDEGLFVKLND
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattatcagagcaagaaatcgtaagaagagataagcttagcaaactacgcgag
ttaggaattaacccttatccagcagatctttatccgttaacccacacaagtaaacaggtt
aaagcagattttcaagaaggtaagaccgtgatagttgccggccgattaatgtctcgaaga
atacaaggtaatgcgagttttgctgaagtacaagatagccaaggacgtatacaagtctat
tttaatagagacgagatttgttctggagaagacaaaaccaaatacaatactgtatataaa
aaattattagatataggtgattttgtaggtatagaaggagaattatttacaactaaagta
ggagaaaaaaccattatggtaaaagactttactattttaagtaaatccttacgtccttta
cctcaaccacgtgtagataccgaagggaaagtacatgatgcttttacagatccagaacaa
cgttacagacaacgttatgcagatttagttgtaaacccacacgtaaaagaagtttttgtt
aagcgtacaaaattatttaatgctatgcgtggcttctttaatgacgctggttattttgaa
gtagaaacgcctattttacaacctattcctggtggtgctgcagcacgcccatttattacc
caccacaatagtttagacattccattatatatgcgaattgcaaacgagttatacttaaag
cgtttaatagttggtggttttgatggtgtatacgagttttctaaaaacttccgtaacgaa
ggaatggatagaacacataatccagaatttacagccatggaaatctatgtatcttataaa
gattacaattggatgatggatttttgtgaaaaactattagaacactgtgctactgctgta
aatggcacaacaaaagctaaatttggagaacacgaaatagattttaaagcgccttatgct
cgagtgaccatggccgattctattaaagactttacaggttttgacattacaggcaaaact
gaagctgaaattcgtgatgcagcaaaaaacatgggaattcaagtggatgacaccatgggt
aaaggaaaattaattgatgaaatttttggtgaaaaatgtgaaggaaactatatccaacct
acatttatcacagactacccaaaagaaatgagtccgctttgtaaagagcacagagataat
ccagaattaactgaacgttttgagttaatggtttgtggtaaagaaattgccaatgcatat
tcagaacttaacgacccaatagaccaacgcgagcgtttcgagcaccaattaaaattagct
caaaaaggagacgatgaagctacagaatttattgactacgattttttacgtgctcttgaa
tacggtatgcctcctacttctgggatgggaattggtatggaccgtttaatcatgttcctt
acaaacaaccaatctattcaagaagtattgtttttccctcaaatgcgaccagagaaaaaa
caagtagacatgacagaagatgaaaaagcagtttttaatattttaaaaacaacatctcct
atagaattaaacaccttaaaaacagaatcgcaattaagtaacaaaaaatgggataaaacc
ataaagggattaactaaattaggcatagcaaaagtagacaaaacagacgaaggtttgttt
gtcaaactcaacgactag
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