Formosa sediminum: FNB79_01905
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Entry
FNB79_01905 CDS
T06103
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fop
Formosa sediminum
Pathway
fop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNB79_01905 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fop03019
]
FNB79_01905 (groL)
03110 Chaperones and folding catalysts [BR:
fop03110
]
FNB79_01905 (groL)
03029 Mitochondrial biogenesis [BR:
fop03029
]
FNB79_01905 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fop04147
]
FNB79_01905 (groL)
Enzymes [BR:
fop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FNB79_01905 (groL)
Messenger RNA biogenesis [BR:
fop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FNB79_01905 (groL)
Chaperones and folding catalysts [BR:
fop03110
]
Heat shock proteins
HSP60 / Chaperonin
FNB79_01905 (groL)
Mitochondrial biogenesis [BR:
fop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FNB79_01905 (groL)
Exosome [BR:
fop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FNB79_01905 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FNB79_01905 (groL)
Exosomal proteins of breast cancer cells
FNB79_01905 (groL)
Exosomal proteins of colorectal cancer cells
FNB79_01905 (groL)
Exosomal proteins of bladder cancer cells
FNB79_01905 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
QDO92779
UniProt:
A0A516GMQ1
LinkDB
All DBs
Position
405683..407311
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGRSFGAPVVTKDGVSVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLAKQTETVGDSSDKIKQVAAISANNDDVIGDLIALAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMITDLDNPYILLYDKKVSTMKDLLPVLEPV
AQSGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENATIDMLGTAERVTIDKDNTTVVNGSGDKDMIKNRVNQIKSQIESTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAVLEAITTANLDETTGIQIVARAIEAPLRTIVENAGGEGSVVVSKVLEGEGNFGYDA
KTEQYVDMLSSGIIDPKKVTRIALENAASVSGMILTTECALIDIKEDAPAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgcgacggattaaaacgcggtgtagac
gctttagcaaatgcagtaaaagtaactctaggaccaaaaggtcgtaatgtaattatcgga
cgttctttcggggcaccagtagtaaccaaagatggtgtttctgtagctaaagaaatcgaa
ttagaagacgcgcttgaaaacatgggtgcacaaatggtaaaagaagttgcttctaaaact
aacgacttagcaggagacggtactactaccgctactgttttagctcaagctatagttaaa
gaaggtcttaaaaatgttgctgcaggtgcaaatcctatggatttaaaacgtggtatcgat
aaagctgttgaagctatcgttgcagaccttgcaaaacaaacagaaactgttggagattct
tcagataaaattaaacaagtagctgcaatttctgctaacaacgacgatgttattggagat
ttaattgctcttgcatttggaaaagttggtaaagaaggtgtaattactgtagaagaagct
aaaggaacagacacctacgtagatgttgtagaaggtatgcagtttgacagaggttactta
tcgccttactttgttactgatagcgaaaaaatgattactgatttagataatccttacatc
ttactttacgataaaaaagtatctacaatgaaggatttattaccagtacttgagcctgta
gcacaatcaggtaaaccgttattaattattgctgaagatgtagacggtgaagcccttgct
actttagttgtaaataaattacgtggatctttaaaaattgctgctgttaaagctccagga
tttggagacagacgtaaagccatgttagaagatatcgcaatcttaactggtggtactgta
atttctgaagaaagaggatttactttagaaaatgctactattgatatgttaggaactgca
gagcgtgtaactattgataaagacaacacaactgttgttaacggttctggagataaagac
atgattaaaaaccgtgttaaccaaattaaatctcaaattgaatctactacaagtgattac
gataaagaaaaacttcaagaacgtcttgctaaattagcaggtggagttgcggtactttat
gttggtgcagcgagtgaagtagaaatgaaagagaaaaaagatcgtgtagatgatgcatta
catgcaactagagctgctgtagaagaaggtattgttgctggtggaggtgttgctttagta
agagctaaagctgtacttgaagctattacaactgctaatttagatgaaactactggtatt
caaattgtagctcgcgctatcgaggctcctttgagaacaattgttgaaaatgcaggcgga
gaaggaagcgttgttgtttctaaagtactagaaggtgaaggtaattttggttacgatgct
aaaactgaacaatatgttgatatgctttcttcaggaattatagaccctaaaaaagtaact
cgtattgctttagaaaatgcagcttctgtatcaggaatgattttaactacagaatgtgct
ttaattgacattaaagaagatgctccagctatgcctccaatgggtggtggtatgccagga
atgatgtaa
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