Formosa sediminum: FNB79_01980
Help
Entry
FNB79_01980 CDS
T06103
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_01980
Enzymes [BR:
fop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FNB79_01980
DNA repair and recombination proteins [BR:
fop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FNB79_01980
Prokaryotic type
FNB79_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDO92794
UniProt:
A0A516GMP3
LinkDB
All DBs
Position
422315..423592
Genome browser
AA seq
425 aa
AA seq
DB search
MTYTLFWFRRDLRLTDNTALVEALKHSKNVLPIFIFDENILNELAADDARVTFIYKKLEL
INSELKLHKSSLLCLKGNPLEVWKDLIKDYNIDAVYTNTDYEPYARTRDAEVETLLKTHN
ITFHNFKDHVIFEPQEVLKQDGQPYTVYTPYKNKWLEHFNGVTLNTDIQFKNLHQQQFDF
PSLKSIGFKASTKAVRAYQLEHVSEYAKFRDFPNKDIGSYLGPHLRFGTVSIREIISELK
PEDSTFLSELIWREFFIQILFHFPHVVHNNFRSKYDDIAWRNNEEEFKLWCEGKTGYPMV
DAGMRQLNKTGYMHNRVRMVTAAFLCKHLLIHWTWGEAYFAKHLLDYELASNNGNWQWSA
GTGCDAAPYFRIFNPITQLEKFDKNLEYVKTWIPEYGTDKYPEPIVEHKEARMRALDTYK
AGIKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacatataccttattttggtttagacgcgatttaagattaaccgataacaccgcactt
gttgaagccttaaagcacagcaaaaacgtattgccaatttttatttttgatgaaaatatt
ttaaatgaattagcagcagatgatgcccgagtaacctttatttacaaaaaattagagctt
ataaattcggaattaaaattacataaatcttcactattatgtttaaaaggaaacccttta
gaggtttggaaagacctaataaaagattataatattgatgctgtatataccaatacagat
tacgaaccttatgccagaactcgagatgctgaagttgaaacactattaaaaactcacaac
atcacatttcataattttaaagaccatgttatttttgaacctcaggaagttttaaaacaa
gacggacaaccttatacagtgtatacaccttataaaaacaaatggttagaacattttaac
ggtgtcactctaaatacagatatacaatttaaaaacttacatcaacagcaatttgatttt
ccaagtttaaaatctatcggatttaaagcctccactaaagcggtcagagcctatcagctg
gaacacgttagtgaatatgctaagtttcgcgatttccctaataaagatattggcagctat
ttagggcctcatttacgttttggcacagtaagtattcgtgaaattatttcagaattgaaa
cctgaggacagtacgtttttaagcgagctaatttggagagaattctttatacaaatctta
tttcattttccgcatgtagtgcacaacaattttagaagtaaatacgacgatattgcatgg
cgaaataatgaagaagaatttaaactctggtgcgagggtaaaaccggatacccaatggta
gatgctggaatgcgacaattaaataaaacgggatatatgcataatcgggtacgtatggta
accgctgcttttctgtgtaaacacttactgatacattggacttggggtgaagcgtatttt
gctaagcatttgcttgattacgaattggcttcaaataatggcaattggcaatggtctgct
ggaacaggttgtgatgcggcaccatactttagaatttttaatccgataactcaattagaa
aaattcgataaaaatcttgaatatgtaaaaacatggattccagaatacggcacagataaa
tatcctgaacctatagtagaacataaagaagctcgaatgcgcgcactagacacttataaa
gcaggaataaaagattaa
DBGET
integrated database retrieval system
