Formosa sediminum: FNB79_03135
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Entry
FNB79_03135 CDS
T06103
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fop
Formosa sediminum
Pathway
fop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FNB79_03135 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fop01007
]
FNB79_03135 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fop03016
]
FNB79_03135 (aspS)
03029 Mitochondrial biogenesis [BR:
fop03029
]
FNB79_03135 (aspS)
Enzymes [BR:
fop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FNB79_03135 (aspS)
Amino acid related enzymes [BR:
fop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FNB79_03135 (aspS)
Transfer RNA biogenesis [BR:
fop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FNB79_03135 (aspS)
Prokaryotic type
Other AARSs
FNB79_03135 (aspS)
Mitochondrial biogenesis [BR:
fop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FNB79_03135 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QDO93007
UniProt:
A0A516GNB4
LinkDB
All DBs
Position
691080..692834
Genome browser
AA seq
584 aa
AA seq
DB search
MYRSNNCGELRSSHINNEVTLSGWVQKVRDKGFMVWVDLRDRYGITQLIFDEERTPKVML
EQAQKLGREFVIQVKGTVIERASKNPNIATGDIEILVSELTILNNAILPPFTIEDETDGG
EELRMKYRYLDIRRNPVKNSLIFRHKVTQEVRNYLSSQDFIEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILDVFEGLTRHLLKEVNGVEVEKFPRMLYDDAMRLYGNDKPDIRFGMEFGELNA
VAQHKDFKVFNDAELVVGIAVPGGNSYTRKEIDKLIEWVKRPQVGALGMVYVRCNDDGTF
KSSVDKFYDQDDLTKWAEVTNAKAGDLICILSGSTNKVRAQLSALRMEMAERLGLRDPKV
FAPLWVIDFPLLEWDEETERYHAMHHPFTSPKPGQIELLDTHPGDVKANAYDLVLNGNEI
GGGSIRIHDKATQAIMLKHLGFSDEEAKAQFGFLMDAFEYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPSKIDDLQLEELSLKLNIKS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaagtaataactgtggcgaactaagatcgtctcatataaataatgaagtaaca
ctttcaggctgggtacaaaaagtacgtgataaaggatttatggtttgggtagacttacgg
gaccgatacggtattacgcaacttatctttgatgaagaacgcacacctaaagtcatgtta
gaacaggctcaaaaattaggtcgtgaatttgtaattcaagttaaaggcactgttatagaa
cgtgcttctaagaaccctaatattgccacaggggatatagaaattttagtttcagaacta
actattttaaataatgctattttaccaccttttactattgaagatgaaactgatggtggc
gaagaattacgcatgaaataccgttacttagacattcgtcgtaatccagttaaaaacagt
ttaattttccgtcataaagttactcaagaagtcagaaactatttatctagtcaagatttc
attgaagttgaaacaccatatttaattaaatctactcctgaaggagctcgagattttgta
gtgccttcaagaatgaacgaaggtcagttttatgccttgccacaatcgccacaaacgttt
aagcaattgcttatggttggtggtatggataaatatttccagattgtaaaatgttttaga
gacgaagacttacgtgcagacagacaaccagaattcacacaaattgactgtgaaatggca
tttgtagagcaagaagatatcttagatgtatttgaaggtcttacccgtcacttacttaaa
gaagttaatggtgtagaggttgaaaaatttccaagaatgctttacgatgatgccatgcgt
ttatacggaaacgataaacctgacatccgtttcggaatggaatttggagaattaaacgct
gttgctcaacataaagattttaaagtttttaacgatgcagaacttgttgttggtattgct
gttccaggaggaaacagttatacaagaaaagaaattgataaattaatagaatgggttaaa
cgtccgcaagttggtgctttgggtatggtgtatgtacgttgtaatgacgatggcactttt
aaatcttcagtagataaattttacgatcaagacgatctaacaaaatgggcggaagttacc
aacgctaaagctggtgatttaatttgtatcctttctggatctacaaataaagtacgcgca
caattaagtgctttacgtatggaaatggctgaacgtttaggcttaagagatccaaaagtg
tttgcgccactttgggttatagatttcccacttttagaatgggacgaagagaccgagcgt
taccatgctatgcaccatccttttacgtctcctaaaccgggacaaattgaattattagac
acccatcctggagatgttaaagccaatgcttatgatttagtattaaatggtaacgaaatt
ggcggcggatctatacgtattcacgataaagcaacacaagctattatgttgaaacattta
ggattctctgatgaagaagccaaagcacagtttggatttttaatggatgccttcgaatac
ggtgcaccaccacacggcggtttagcatttggtttagaccgtttggtagctattttaggc
ggacaagaaactatccgagactttattgcattcccaaaaaataactctggccgagacgtc
atgattgatgcgccttctaaaattgacgacttacagcttgaagaattaagcttaaaacta
aatataaaatcataa
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