Formosa sediminum: FNB79_04205
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Entry
FNB79_04205 CDS
T06103
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fop01011
]
FNB79_04205
Enzymes [BR:
fop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FNB79_04205
Peptidoglycan biosynthesis and degradation proteins [BR:
fop01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FNB79_04205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
QDO95649
UniProt:
A0A516GVU5
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Position
942609..944090
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AA seq
493 aa
AA seq
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MLVSGEKYVVDTIIAGKTYYKKALKITDSLSITDLKDHAYSAKVDQLWLDELYNNTLYDS
IYESVTDLTYEEVDYPELNTDTLKKRLIDLDAKTPFNVAYNPALESVIKSYLKRRRNSLQ
KLMVLSEYYFPMFERELDNYNLPLEIKYLSIVESALKPRAKSRVGATGLWQFMYTTGKSY
DLDVSSYVDERSDPLKSTAAAAKYLSKLYSIFGDWDLALAAYNSGPGNVTKAIRRSGGYE
NYWNIRNYLPRETAGYLPAFLATMYIFENAEELGFSRSKPEIAYLETDTLHVKQMITLDQ
VSEVTGVKIEELQFLNPTYKLDIIPFIKDKTYTLRLPVEAIGPFVANEELIYAFAKAEFD
KREKPLPELIDSETKTRYTVKSGDYLGKIARKYNVRVSQIKQWNGLRSNNLSIGQRLTIY
PRNASVIPKKVMPKPTTSTVQTSGGHTYVVKKGDSLWSIAQKHSGISVENIKEWNDISGT
SLKPGMTLKMYKG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgttagtctctggagaaaaatatgttgtagacaccattattgctggtaaaacatattac
aagaaagctcttaaaattacagattctttaagcattacagatttaaaagatcatgcttat
tctgcaaaagtagatcagctctggttagacgaactctataataatacactttacgattct
atttatgagtctgtaaccgatttaacttacgaagaagtagactatccagaactaaataca
gatacacttaaaaaacggttaatagatttagatgcaaaaaccccctttaatgtggcttac
aatcccgctttagagagtgtgattaaatcgtatttaaaacgcagacgaaattcacttcaa
aaattaatggttttaagtgaatattattttccgatgtttgagcgcgaattagataattat
aatcttcctttagaaattaaatatttatctatagtagagtctgctttaaaaccccgtgca
aaatctagagttggagccactggtttatggcaatttatgtatactacaggaaagtcttac
gatttagatgttagtagttatgttgatgagcgtagcgacccattaaaatctactgcagca
gcggcaaaatatttatctaaattatactctatttttggggattgggatttggcgttagca
gcttataattctggtccaggaaatgtaacaaaagccattagacgctctggaggttacgaa
aattattggaatattagaaattaccttccacgtgaaacagctggttatttacctgcattt
ttagcaacaatgtatatttttgaaaatgctgaagaattaggattttcaagatcaaaacca
gaaatagcatacttagagaccgatacccttcatgtaaaacaaatgattactttagatcaa
gtctctgaagttacaggagttaaaattgaagaattacagtttttaaatccaacctacaag
ctagatattattccgtttattaaagataaaacctatacgttacgattacctgtagaagcc
atagggccttttgttgcaaatgaagagctaatatatgcttttgctaaggctgaatttgat
aaacgagaaaaaccattgccagaattaattgattctgaaactaaaacacgatatacggta
aaatctggcgattatttaggtaaaattgctcgaaaatataacgtgcgcgtcagtcagatt
aaacaatggaatggtttgagaagtaataacttaagtattggacaacggttaactatttac
cctagaaatgcatcagtaattccaaagaaagtaatgccaaaaccaacaacatctacagtg
caaacttctggcggacacacttatgttgttaaaaaaggagactctttatggagcatcgct
caaaaacattctggaatttctgttgaaaatattaaagaatggaacgatattagcggtaca
agtttaaaaccaggaatgaccttaaaaatgtacaaaggctaa
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