Formosa sediminum: FNB79_04400
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Entry
FNB79_04400 CDS
T06103
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_04400
Transporters [BR:
fop02000
]
Other transporters
Pores ion channels [TC:
1
]
FNB79_04400
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GFIT
Motif
Pfam:
OmpA
TSP_3
DUF748
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QDO93245
UniProt:
A0A516GP05
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Position
985299..986651
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AA seq
450 aa
AA seq
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MKNLSRLLFAMLLVFGFSNTYAQDENNPWAIGFGVNAVDFYPNGDGAPFGEGFGDEYFNV
GDHWNILPSLSTISVARHITGGLSFGVTGSINKIENYGEESVSDLSYYGLDGTFKYGFLN
TSVFNPFVGVGGGYTWVDEIGAGTINGSLGFNVWFTDNIGLTLQSSYKHAFEDYLDSHFQ
HSAGITIKFGGKDTDKDGVYDKNDACPDVFGLAMFNGCPDTDGDGIEDSKDSCPNEAGTA
EFNGCPDTDGDGVADPDDACPEVAGLKELNGCPDADGDGVADGDDKCPNEAGPAENNGCP
WPDKDGDTVIDKDDKCPDIPGTVANNGCPELSEAVQKSLNEYAKTILFDTGKSSIKAHSE
EVLKNIIDILKEYPNAKFTVEGHTDSSGSDSLNMKLSESRALSVKDYLVKNGIDEFRLSS
KGYGETKPIDSNKTRAGRANNRRVEINLVK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttagcagattattgttcgcaatgttgctggtatttggttttagcaacact
tatgcgcaagatgaaaacaacccttgggcgattggctttggagtaaatgcagtcgatttc
tatcctaacggagatggagcccctttcggtgaaggattcggagacgaatattttaatgta
ggagatcactggaacattttaccttctttatcaactatttctgtagcacgtcacatcaca
ggtggtttgtcttttggagtaacaggatctattaataaaatcgaaaattacggagaagag
tcagtttctgatttatcttactacggacttgatggtacgtttaagtatggtttcttaaat
actagcgtattcaatcctttcgttggtgttggtggaggttacacttgggtcgacgaaatt
ggagcaggaactattaacgggtctttaggattcaacgtatggtttactgataacatcggt
cttacattacaatcttcttacaaacatgcttttgaagattacttagattctcacttccaa
cattcagctggaattacaattaaatttggaggaaaagacactgataaagatggtgtatac
gacaaaaacgatgcttgtccagatgtatttggtttagcaatgtttaatggttgtcctgat
acagacggagatggtattgaagatagtaaagattcttgtccaaacgaagctggtactgca
gaatttaacggatgtcctgatacagacggagacggtgtagctgatcctgatgatgcttgt
ccagaagttgctgggttaaaagaattaaacggttgtcctgatgctgatggcgatggtgtt
gctgatggagatgataaatgtccaaacgaagcaggtcctgctgaaaacaatggatgtcct
tggccagataaagatggtgacactgtaattgataaagatgataagtgtccagatattcct
ggtactgttgcaaacaacggatgtccagaattatctgaagctgttcaaaaatctttaaat
gaatatgctaaaactatcttattcgatacaggtaaatcttctattaaagctcactctgaa
gaagtattaaaaaacattatcgatatcttaaaagaatatcctaatgctaaatttactgtt
gaaggtcacactgatagttcaggatctgattctttaaacatgaagttatctgaatctaga
gcattatctgtaaaagattacttagtgaaaaatggtatcgatgaatttagattatcttct
aaaggatacggtgaaactaagccaatcgattctaacaaaactagagctggtagagctaat
aacagacgtgttgaaattaacttagttaaataa
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