Formosa sediminum: FNB79_05235
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Entry
FNB79_05235 CDS
T06103
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_05235 (radA)
DNA repair and recombination proteins [BR:
fop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FNB79_05235 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA
DUF7125
AAA_22
Lon_C
AAA_24
AAA_16
CobU
NTPase_1
AAA_5
nSTAND_NTPase5
AAA_14
RsgA_GTPase
ABC_tran
NACHT
DUF1106
Rad51
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QDO93403
UniProt:
A0A516GPH3
LinkDB
All DBs
Position
1199035..1200396
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AA seq
453 aa
AA seq
DB search
MAKVKTTFFCQSCGAQYAKWQGQCNSCKAWNTIVEEVVQTPEKSDWKTPSSSVHKKASRP
LLINEIDASQEARLDTYDQELNRVLGGGIVPGSLTLLGGEPGIGKSTLLLQVALKLPYKT
LYVSGEESQKQIKMRAVRINPNNSNCYILTETKTQNIFKQIEALQPDVVIVDSIQTLHSD
YIESSSGSISQIKECTTELIKFAKETATPVVLIGHITKDGHIAGPKILEHMVDTVLQFEG
DRNHVFRILRANKNRFGSTNELGIYEMQGSGLREVSNPSEILISKKDEELSGNAIAATLE
GMRPLMIEVQALVSTAVYGTPQRSATGFNAKRLNMLLAVLEKRAGFRLGAKDVFLNITGG
ITVDDPAIDLAVVAAILSSNEDESLAKDFCFAAEVGLSGEIRPVQRVEQRIQEAEKLGFS
TIFVSKYNKITLKPKAIKIQLISKIEDLVDLIV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggttaaaacaacttttttttgtcagagctgtggtgcgcagtacgctaaatgg
caaggccaatgtaattcatgtaaagcttggaataccatagtcgaagaagtggtgcaaacg
cctgagaaaagcgattggaaaacaccgtcttcaagcgttcataaaaaagcgtctagacct
ttgttaataaatgaaatcgatgcatctcaagaagcacgattagatacttacgaccaagaa
ttgaatcgcgttttaggcggaggtattgttcctggatctttaacacttttaggcggagaa
cctggcataggtaagagtacattattgttgcaagtcgcattaaaattaccttacaaaaca
ttatatgtttcaggtgaggagagccagaaacaaattaaaatgcgtgcagtacgtattaat
cctaataatagtaattgctacattttaaccgaaacaaaaacacaaaatattttcaaacaa
atagaggctttgcaacctgatgtagtaattgtagattctattcagacattacatagcgat
tatatcgagtcgtcttcgggaagtatttctcaaataaaagaatgtactactgagcttata
aaatttgctaaagaaactgcaacacctgttgttttaattgggcatattaccaaagatgga
cacattgcagggccaaaaattttagaacatatggtagatacggtacttcagtttgaaggc
gatcgtaatcatgtgtttagaattttacgtgccaataaaaatagatttggttcgaccaat
gaactaggaatatacgaaatgcaaggttctggattgcgagaagtttctaacccttcagaa
attttaatctctaaaaaagatgaagaattaagtggtaatgcaattgctgcaacactagaa
ggtatgcgcccgttaatgatagaagttcaggcattggttagcacagctgtatatggtaca
ccacaacgctctgcgactggatttaatgctaaaagattaaatatgttgttggctgttttg
gaaaaacgagcagggtttaggttaggcgcaaaagatgtgtttttaaatattacaggagga
ataaccgtagatgatcctgctatagatttggctgttgtagctgctatattatcttccaat
gaagatgaatccttggctaaagatttttgttttgctgcagaagttggtctgtccggagaa
atcagacctgtacaacgtgtagagcaacgtattcaagaagctgaaaaactggggttttct
accatttttgtgtccaagtataataaaattactttaaagccaaaggctattaaaattcag
ttgatatccaaaattgaagatttagtagatttaatagtgtaa
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