Formosa sediminum: FNB79_05590
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Entry
FNB79_05590 CDS
T06103
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fop03019
]
FNB79_05590
03009 Ribosome biogenesis [BR:
fop03009
]
FNB79_05590
Messenger RNA biogenesis [BR:
fop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FNB79_05590
Ribosome biogenesis [BR:
fop03009
]
Prokaryotic type
rRNA processing factors
FNB79_05590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QDO93470
UniProt:
A0A516GQ30
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All DBs
Position
complement(1289462..1291006)
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AA seq
514 aa
AA seq
DB search
MDKELIVRSGPQHVDFALLKDGKLIELHKDEGGNNFSVGDVFIAKIRKTVPGLNAAFVNV
GYEKDAFLHYHDLGPKLPSLLKFTKRVSTGKLNDFFLKDFPFEKEIDKNGSIVDVLKSNQ
SLLVQIVKEPISTKGPRISSELSIAGRYIVLVPFSDRISISQKIEDKDEKDRLKRLVKSI
TPLGFGIIVRTVAEGKKVAELDKDLQNLLGRWTAMCKKLHKAHHPSKVLGELNKASSILR
DIFNDTFTSIQVDDEELYHQIKDYVQLIAPNKESIVKLYQSNVPIFEKFGVERQIKTSFG
KTVSMAKGAYLVVEHTEALHVIDVNSGNRSNKANSQEDTALEVNMIAAQEIARQLRLRDM
GGIIVIDFIDMTNAENRKTLFNYLRDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TREDNPNGVQGEEVEAPIILVQKITQELERLLKKDYKKLVLNTHPFIAAFLTKGFPSVRS
KWFIEHKKWVKIMPRDAYTYLEYHFFDKDGNQIN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaattgatcgtaagatctggtccccaacatgttgattttgccttattaaaa
gatggaaaacttattgaattacataaagacgaaggaggtaacaatttttctgttggtgac
gtgtttatcgccaaaataagaaaaactgttcctggactaaatgctgcctttgtaaatgtt
ggctacgaaaaagacgcctttttacattatcacgacctaggtcctaaactcccttccctt
ttaaaattcacaaaacgtgtaagcacaggtaaactaaacgatttctttttaaaagatttc
ccgtttgaaaaagagattgataaaaatggaagcatcgtagatgtcctaaaatctaatcaa
tccctacttgtacaaattgtaaaagaaccaatatctacaaaaggcccaagaataagctct
gagctatctattgctggtagatatattgtattagttcctttttctgatcgcatttcaatt
tctcaaaaaattgaagacaaagacgaaaaagaccgattaaaacgactggttaaaagtatt
acgcccctagggtttggtattattgtacgtacagtagcagaaggcaagaaagttgccgaa
ttagataaagatttacaaaatttacttggtcgttggactgcaatgtgtaaaaaactacac
aaagcacatcacccgagtaaagtattaggagaattaaacaaagcctcgtctattttacga
gatatttttaatgacacttttactagtattcaagtagatgatgaagaactttatcaccaa
attaaagattatgtgcaacttatcgcacctaataaagaatctattgtaaaattgtatcag
tctaatgttcctatatttgaaaaatttggagtagaaagacaaatcaaaacgtcgtttgga
aaaacggtttctatggcaaagggtgcctatttggtagtagaacataccgaagcccttcat
gttatagatgttaacagtggtaatcgctctaacaaggccaattctcaagaagacacagca
ttagaagtaaatatgattgctgcccaagaaatagcgagacaacttcgattacgcgatatg
ggaggcattattgttatcgattttatagatatgaccaatgctgaaaacagaaaaacgctc
ttcaactaccttcgtgatgaaatgaaggatgatagagcgaaacacaaaatattacctcca
agtaaatttggattgatacaaattacaagacaacgtgttcgcccagaaatgaacataaaa
acccgtgaagataatcctaacggagtacaaggcgaagaagttgaagcaccaattatattg
gtacaaaaaataactcaagaacttgagcgattattaaaaaaagactataaaaagttggtt
ttaaacacacatccttttatagcagcctttttaacaaaaggctttccatcagtacgttca
aaatggtttattgaacacaaaaaatgggtaaaaattatgcccagagatgcttacacatat
ttagaataccatttttttgataaagatggtaatcaaatcaactaa
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