Formosa sediminum: FNB79_05595
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Entry
FNB79_05595 CDS
T06103
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fop03032
]
FNB79_05595
03036 Chromosome and associated proteins [BR:
fop03036
]
FNB79_05595
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_05595
DNA replication proteins [BR:
fop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FNB79_05595
Chromosome and associated proteins [BR:
fop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FNB79_05595
DNA repair and recombination proteins [BR:
fop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FNB79_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QDO93471
UniProt:
A0A516GPL5
LinkDB
All DBs
Position
complement(1291382..1291675)
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AA seq
97 aa
AA seq
DB search
MTKADLVAKISEKLGIEKGDVQATVETFMEEVKTSLEAGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKTNVDVKE
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggctgatttagtagcgaaaatttctgagaaattaggaatcgagaaaggtgac
gtacaggcaactgtagaaactttcatggaagaagtaaagacatcattagaagctggcgat
aatgtatatttaagaggatttggtagttttatcattaaaactcgtgctgaaaaaacaggt
agaaatatttctaaaaataccactatcaagataccggctcacaacattcctgcatttaaa
cctgcaaaagtatttgtagaaggtgtaaaaactaatgtagacgttaaagaataa
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