Formosa sediminum: FNB79_05795
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Entry
FNB79_05795 CDS
T06103
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fop03000
]
FNB79_05795
Transcription factors [BR:
fop03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
FNB79_05795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
HTH_5
HTH_IclR
AsnC_trans_reg_3
TrmB
NirdL-like_HTH
MarR_2
MarR
LexA_DNA_bind
HTH_11
HxlR
HTH_10
HTH_Crp_2
B-block_TFIIIC
HTH_CodY
HTH_34
Fe_dep_repress
Rrf2
DUF5817_CT
PAV1-137_bromodom-like
HTH_47
Motif
Other DBs
NCBI-ProteinID:
QDO93509
UniProt:
A0A516GPS9
LinkDB
All DBs
Position
complement(1328561..1329031)
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AA seq
156 aa
AA seq
DB search
MKISNQNIEIDGIDKEILRALMEDARTPILEIARSVGISGAAIHQRLRKLEKSGLISGSK
FTINPKVLGYTTMAFIGIYLDKAMSNPEAVKQLKKIPEVIECHYTTGNWSIFIKILCRDN
EHLMQLLNKDIQSIVGVSRTETFISLQQQIDRQIPI
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttctaatcaaaatattgaaatcgatggtatagacaaggaaattcttcgtgct
ttaatggaagatgccagaactcctatactagaaattgccagaagtgtaggtatttctgga
gcagcaattcatcagcgcttacgtaaattagaaaaatctggattaatatcgggttctaaa
tttacaattaatcctaaagtattaggatatactactatggcatttataggtatttactta
gataaagccatgagtaatcccgaagctgttaaacagctaaaaaaaattcctgaagttata
gaatgtcattacacaacgggtaattggagtatttttattaaaattctttgccgtgacaac
gaacaccttatgcagcttctaaataaagatatccaatctattgtaggggtttctagaact
gaaacttttatctcgcttcagcaacaaatagatagacaaattccaatttaa
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