Formosa sediminum: FNB79_06005
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Entry
FNB79_06005 CDS
T06103
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_06005
Transporters [BR:
fop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNB79_06005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DUF7292
Motif
Other DBs
NCBI-ProteinID:
QDO93547
UniProt:
A0A516GPU1
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Position
complement(1376434..1378047)
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AA seq
537 aa
AA seq
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MKNIINKFTVGIALALSIVSCHDDLDQTPIDPDSFTEEDVFANIDEAKGALAKLYASLAL
TGQEGPAGDADISGIDEGFSQYTRMLFNLNELTTDHSVVGWGDPGLPDLHNLSWSSGNDF
SEAMYYRLGQEVSFCNSFISNASALTDAEAETFIAEARFLRAYAYYNLIDLYANVPLTTE
VSTELPLQSDRTELFSFVETELLEIQDLLAESNEYGRVDQVAAWALLSRLYLNAETWIGE
DKYADCITYSNAVINSSYSINTNDVNGNGSAYDELFLADNNTNGAQNEFIFTANFDGVQS
TTYGGTTFLIHSAIGGSMDPLAYGVNGGWAGLRTTKALVNKFSSSITARDSDGYPTAWSD
HRAMFYTDGQAYEITTISNTFTDGYAVTKFSNVNSDGSQANDTSGEFADTDIPLIRLAEI
YLNYAEAALRGGGGDLSTAVNLVNQLRTRAYGNDSGNISISDLSLSFILNERSRELYWEG
LRRTDLIRFDQFTTDTYVWPFKGGSSDGNGVESYREIFPLPTNVISINPNLEQNTGY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataataaataaattcacagttggtatcgctttagcgctctctatagtgtct
tgtcatgacgatttagaccaaacacctatagatccagatagctttacagaagaagatgta
tttgctaacatagatgaagctaaaggtgcattagcaaaattatatgccagtttagcatta
accggccaagaaggtcctgcaggcgatgcagatatttcaggtatagacgaaggattttcg
caatacacacgtatgctttttaatcttaacgaattaactacagatcactctgttgtagga
tggggagacccaggtttaccagacttacataacttaagctggtcttcaggaaacgatttt
tcagaagcaatgtattacagattaggtcaggaagtctctttttgtaactcatttattagc
aatgcttctgccttaacagatgcagaagcagaaacttttattgccgaggcacgtttttta
agagcctatgcctactataatttaatagatttatatgcaaacgtacctttaacaacagaa
gtgtctacagaattacctctgcaaagtgatcgtacagaactgtttagttttgttgaaact
gaattgttagaaatacaagatttattagcagaaagtaatgaatatggtcgtgtagatcaa
gttgcggcttgggcactattatcacgcttatatttaaatgctgaaacttggattggcgaa
gataaatatgcagattgtataacctattctaatgccgtaattaactcgtcttattcaata
aacactaacgatgttaacggcaatggctctgcttacgatgaattgttcttagcagacaac
aatactaatggggctcaaaatgagtttatttttactgcgaattttgatggagtacaatct
actacttacggtggtacaacatttctaattcactctgcaataggtggcagtatggatccg
cttgcttatggtgttaacggaggttgggctggtctgagaacaacaaaagcattggttaat
aaattttcaagttcaattactgctagagatagtgacggttacccaacagcttggtcggac
catcgtgcaatgttttacacagacggacaagcctacgagattacaaccatttcaaacacc
tttacagatgggtatgctgtaactaaattctcaaatgtgaatagtgatggtagccaagcc
aacgatacctctggagaatttgcagatacagatattcctctaataagattagccgaaatt
tatttaaactacgctgaggcggctttacgtggcggtggcggagatttaagtacagctgta
aacttagtaaaccaactaagaacacgtgcctatggtaatgactctggaaatatatctatt
tcagatttatctttaagtttcattttaaatgaacgctcaagagaattgtattgggaagga
ttacgtagaacagatttaatacgttttgaccagtttactacagacacttatgtgtggcca
tttaaaggaggctcaagcgatggaaatggagttgaatcttatagagaaatctttccttta
ccaacaaacgtaatttctataaatccaaatttagaacaaaacacaggatactaa
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