Formosa sediminum: FNB79_06130
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Entry
FNB79_06130 CDS
T06103
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fop03009
]
FNB79_06130
Enzymes [BR:
fop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FNB79_06130
Ribosome biogenesis [BR:
fop03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FNB79_06130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
DUF7348
Motif
Other DBs
NCBI-ProteinID:
QDO93572
UniProt:
A0A516GPZ2
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All DBs
Position
1408428..1409288
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AA seq
286 aa
AA seq
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MSRQQGSNKKGKASGRGANNTRSKSYARGNAPIKKQGPTTPVKSQSKPSTNAGEIRLNKY
IANSGICSRRDADMHIATGLVSVNGKIVTEMGYKVKLEDEVRFDGGRVNPEKKAYVLLNK
PKGFATTTSEGKGRTVMDLVANATSSKIKPIGRLGRNSLGLILFTNDEDVVKKFTNSKNG
VPRLFHIELNKNLKHEDFIKIKEGFKIEGKLIAVEEISYIDKGSKKEIGLKVKNTGSTII
RSIFDYLKYDIEKIDCVSIGQLTKKDIPRGHWKHLTEQEVIGLKML
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacaacaaggcagcaataaaaaaggaaaagcttcaggacgtggagcaaacaat
acacgtagtaaaagttatgcaagaggaaatgcgcctataaaaaaacagggaccaacaaca
cctgtaaaatctcagtctaagccatcgactaatgctggcgagatccgtttaaataaatac
atcgcaaattcgggtatctgttcacgtcgtgatgcagatatgcatatagccactggtttg
gtttctgtaaatggtaaaatagttaccgaaatgggttacaaagtgaagcttgaagatgaa
gtacgttttgatggtggtcgtgtaaatccagagaaaaaagcttacgtattattaaataaa
ccaaaaggtttcgctacaacgactagcgaaggtaaagggcgtacagttatggatttagta
gcaaatgctacctcttctaaaattaaacctattggacgtttaggaagaaattctttagga
ttaatactgtttacaaatgacgaagatgttgtgaagaaatttacaaattctaaaaatggt
gtgcctagattatttcatatcgaattaaataagaatttaaaacacgaagattttattaaa
attaaagaaggttttaaaattgaaggtaaacttattgctgtagaagaaataagttacatt
gataaaggttcaaaaaaagaaattggtttaaaggttaaaaataccggtagcaccattatt
cgtagcattttcgattacttaaaatacgatatcgaaaagatagattgtgttagtattggg
cagcttactaaaaaagatattcctcgtggccactggaaacacttaacagaacaagaagta
ataggtcttaaaatgctgtaa
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