Formosa sediminum: FNB79_06415
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Entry
FNB79_06415 CDS
T06103
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fop
Formosa sediminum
Pathway
fop00470
D-Amino acid metabolism
fop00550
Peptidoglycan biosynthesis
fop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FNB79_06415 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FNB79_06415 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fop01011
]
FNB79_06415 (murD)
Enzymes [BR:
fop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FNB79_06415 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fop01011
]
Precursor biosynthesis
Amino acid ligase
FNB79_06415 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
DAO
Motif
Other DBs
NCBI-ProteinID:
QDO93624
UniProt:
A0A516GQ15
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Position
1471404..1472735
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AA seq
443 aa
AA seq
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MKRLVILGGGESGVGTALLGKEKGFDVFVSDKGKIKDKYKNVLIHHEIAWEELQHTEAKI
LNADVVMKSPGIPDKVPLVKQLIENGVSVISEIEFAAQFTTATIVGITGSNGKTTTASLT
YHILNQELDVGLAGNIGDSFAKQVLEYNFKNYVLEISSFQLDGVQDFKPHIAVITNITPD
HLDRYNYNFDAYIASKFRIAMNQTKEDYLIYDADDPVLVDWLERHPVQSQLLPFSLVKPV
ENGAYLEKENIKITIDNNQIIMSARDLALEGKHNVKNAMAASTVAHLLKIRKQTIRESLE
NFQGVEHRLEHVLKINKVQYINDSKATNVNATYYALESMSAPTVWIVGGEDKGNSYEELY
SFVNTKVKAIICLGVNNEKLLQNFGNMVDVIVETQYMSEAVKIAYKIAEAGDNVLLSPAC
ASFDLFENYEDRGRQFKEAVRNL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggttggttattcttggtggaggagaaagtggtgtgggcacagcgcttttagga
aaagaaaaagggtttgatgtgtttgtttctgataaaggaaaaataaaagacaaatataaa
aacgttcttatacatcatgagattgcttgggaagaattacagcatacggaagctaaaatt
ctaaatgcagatgtggttatgaaaagcccaggtattccagacaaagtgccgttggtaaag
cagttaattgaaaatggcgtttctgtaatttctgaaatagaattcgcagcgcaatttaca
acagcaaccatagttggaattactggaagtaatggaaaaacaacaactgctagtttaacc
taccacatccttaatcaggagttagatgttggtttggcaggtaatataggggatagtttt
gcgaaacaagttttagaatacaattttaaaaactatgtgcttgagattagtagttttcaa
ttagatggcgtacaggattttaaaccacatattgcagtaataaccaatattacaccagat
catttagatcggtataattataattttgatgcatatatcgcttcaaaatttagaattgca
atgaatcaaacaaaagaagattacttgatttatgatgcagatgaccccgtattagtagat
tggcttgaaaggcatccagtacaatctcaattattgccattttcactagtaaaacctgta
gaaaatggtgcgtatttagaaaaagaaaatattaaaataacaatagataataaccagata
attatgtcagcaagagacctagcattagaaggtaagcataatgttaaaaatgcaatggct
gcatcaacagtggcgcacttattaaaaataagaaagcaaactattcgtgagagtttagag
aattttcaaggcgtagagcaccgtttagagcatgttttaaaaattaacaaggtccaatat
ataaacgattcaaaagcaacaaatgtaaatgctacatattatgctttagaaagcatgtca
gcacctacagtttggattgttggcggtgaggataaggggaatagttatgaagaattatat
tcatttgtaaatactaaagttaaagcaattatttgcttaggtgtaaataacgaaaagttg
ttgcaaaactttggtaacatggttgatgtaattgttgaaacacaatacatgagcgaagca
gtgaaaattgcttataaaatagcagaagcaggtgataatgtattgttgtctccagcatgt
gctagttttgatttgtttgaaaattacgaagatagaggaagacaatttaaagaagctgta
agaaatttataa
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