Formosa sediminum: FNB79_07285
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Entry
FNB79_07285 CDS
T06103
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_07285
Transporters [BR:
fop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNB79_07285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QDO93788
UniProt:
A0A516GQJ3
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All DBs
Position
complement(1679284..1680750)
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AA seq
488 aa
AA seq
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MKKIIYLLLGATLTTAVSCSDDFLEKDPSEFMSDEEIAEISPNYPELSEAILRGNYENMY
VTGSGGTDLDHDDFGQKGYDIYSDMLSGDMVLGGLNYGWYSGISEMQSTIDFTDNDNYKP
WRYYYRIVNGANSVIDRYVGNDAELEAGSEAIYSFAQARAMRAYAYFYLANLFSTSYNPT
EEILPIYTSLSQDNQPLSTTADVYALIVEDLKYAIENLEGFSRASKSYINQTVAQGLLAY
AYAAMGENTLAKQASSDAILSSGASIVSETEAVGGFNDVTTSAWIWGTDITIASDLDLVS
WWGQVDLFTYSYAWAGDPKIINDELYAAIPDNDVRKGQFVNAYGDGQLYPINKFYAPDRV
VGGQRNIETDYLYMRIDEMYLLYAETAAKSGDEATAKSALKTLLEERLDDTSYVDQLSGD
ALLDEIILQTRIEFWGEGKSYLLMKRNNYDITLGSNHLTYPNQTISSDDDRLTLDIPQSE
IQNNPFIN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaataatatatttactattaggagccacattaactactgctgtaagttgtagt
gatgatttccttgaaaaagatccatcagaatttatgtctgatgaagaaattgcagaaatt
tcaccaaattacccagaattatcagaagctattctaagaggtaattacgaaaacatgtat
gttacaggttctggaggtacagatttagaccatgatgatttcggtcaaaaaggatatgat
atttacagcgatatgttatctggagatatggtattaggaggattaaattatggatggtat
tctggaatttcagaaatgcaatctactatagattttacagataatgataactacaagcca
tggagatactattaccgtattgttaatggtgcaaactctgtaattgatcgttacgtcgga
aatgatgctgaattagaagcgggatctgaagctatatattcatttgctcaagcacgtgca
atgcgtgcttacgcttatttttatttagctaacttattttctacatcatacaatcctaca
gaagagattttaccaatttacacatcattatctcaagacaatcaaccactaagtactaca
gcagatgtttacgcattaattgtagaagatttaaaatatgctatagaaaacttagaaggt
tttagcagagcatctaaatcttacattaatcaaacagtagctcaaggtcttttagcttat
gcttatgctgcaatgggagaaaacaccttagcaaaacaagcgagttcagatgctatctta
agctctggagctagtattgtaagcgaaactgaagccgttggtggttttaacgatgttaca
actagcgcttggatttggggtacagatattacaattgcatcagacttagatttagtatct
tggtggggtcaagtagatttatttacttacagttatgcttgggctggagatcctaaaatc
attaacgacgaattatatgctgcaattcctgacaacgatgttagaaaaggacaatttgtt
aacgcatatggtgacgggcaattatacccaattaataaattttatgctccagatagagtt
gtaggaggacaacgtaatattgaaacagattatttatacatgcgtatagatgaaatgtat
ttattatatgctgaaactgctgcaaaatcaggagacgaagcaactgcaaaatctgctctt
aaaacattattagaagaacgtttagatgatacttcttatgtagatcaattaagtggtgat
gctttattagacgaaattattttacaaactcgtatagaattttggggagaaggaaaaagc
tacttgttaatgaaacgtaacaattacgatattacactaggaagtaaccacctaacttac
ccaaatcaaacaatatcttctgatgatgataggttaactttagatatacctcaatcagaa
attcaaaataacccgtttattaactaa
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