KEGG   Formosa sediminum: FNB79_07680
Entry
FNB79_07680       CDS       T06103                                 
Name
(GenBank) DUF853 family protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
fop  Formosa sediminum
Brite
KEGG Orthology (KO) [BR:fop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fop03400]
    FNB79_07680
DNA repair and recombination proteins [BR:fop03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     FNB79_07680
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 AAA TrwB_AAD_bind AAA_16 ResIII AAA_10 FtsK_SpoIIIE AAA_30 Zot AAA_19 P-loop_TraG CbiA AAA_11 Zeta_toxin T2SSE AAA_7 AAA_6 SRP54 PHA01746 RF-1
Other DBs
NCBI-ProteinID: QDO93866
UniProt: A0A516GQT2
LinkDB
Position
complement(1747446..1748963)
AA seq 505 aa
MTTNDAFLKEITEGNTFKGDYITMGSAILNENPLKNAYVNIPLKTLNRHGLIAGATGTGK
TKTLQVMAEQLSDQGIPVLLMDIKGDLSGLAKPGVSNNFIETRHEKIGLEYTTKGFPVDV
LTLSHQDGVRLRATVSEFGPILLSRILDLTDTQSGIVSVIFKYCDDNKLPLLDLKDFKKI
LQYATQEGKAEFQEAYGRISTASTGAILRKVVELEQQGADLFFGETSFDVQDLTRIDSDG
RGYINILRLTDIQDKPKLFSTFMLSLLAEIYTTFPEQGDSGRPELVIFIDEAHLIFSEAS
KALLNQIESIVKLIRSKGVGLYFVTQNPTDVPEAVLGQLGLKIQHALRAFTAKDRKAIKL
TAQNYPDSAYYDTESVLTNLGTGEALISALDEKGRPTPLAATMMRAPMSRMDILTDTELS
ELISESKLVKKYNQTIDRESAYEILTDKINRAEAEAEKEAEREEQRSKKTTSRRKSTVMN
PIVKVLTSATFIRSVFGILTKVMKK
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgaccaccaacgacgcttttttgaaggaaataactgaaggaaatacatttaaaggagat
tatattactatgggatctgccatattaaatgaaaaccccttaaaaaatgcctatgtaaat
atacctttaaaaacgttaaacagacatggtttaattgccggtgctacaggtacaggtaaa
actaaaactttacaagtcatggcagaacaactttctgaccaaggcattcctgttttatta
atggatattaaaggggatttaagcggattagctaaacctggtgtaagcaataattttatt
gagacacgccatgaaaaaattggacttgaatacactactaaaggttttcctgtagatgtc
cttaccctttctcaccaagacggcgttagacttcgcgccactgttagtgaatttggacca
attttactctcgagaatcctagacctaacagacacccaatctggtattgtctctgttatt
tttaaatattgcgacgataataaattaccattacttgatttaaaagattttaaaaaaata
ttacaatatgcaactcaagaaggtaaagcagaattccaagaagcctacggaagaatctcg
acagcatccaccggtgctattttaagaaaagttgtagaactagaacaacaaggtgccgat
ttattttttggagaaacatcttttgatgttcaggatttaacgcgaattgatagtgatggt
cgcggatacattaatattcttagacttacagatattcaagacaaaccaaaattgttctca
acctttatgttaagtttattagcagaaatttacactacttttccagaacaaggggatagt
ggcagacctgaattagttatttttattgatgaagcgcatcttatttttagcgaagcttct
aaagcactactaaaccaaatagaaagtattgttaagttaatacgtagtaaaggtgttggt
ttatattttgtaacgcaaaatcctacagatgttccagaagctgtattggggcaattagga
ttaaaaatacagcacgcgttacgtgccttcacagccaaagaccgtaaagcaattaaatta
accgctcaaaactatccagattctgcttattacgatacagaaagcgtacttactaattta
ggaacaggagaagctttaatttctgctttagatgaaaaaggaaggccaactccattagca
gcgactatgatgcgcgctccaatgagccgtatggacatcttaacagatactgaattatct
gagctaatttcagaatctaaattagtaaaaaaatacaaccaaaccattgacagagaaagc
gcttacgaaattttaaccgacaaaataaatcgtgctgaagcagaggctgaaaaagaagcc
gagcgtgaagaacaacgctcaaaaaaaacaacatccagacgtaaaagcacggtcatgaac
ccgatagtaaaagtgttaacgagcgcaacttttattagaagtgtttttggaattttaact
aaagtgatgaaaaaataa

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