Formosa sediminum: FNB79_07680
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Entry
FNB79_07680 CDS
T06103
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_07680
DNA repair and recombination proteins [BR:
fop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FNB79_07680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA
TrwB_AAD_bind
AAA_16
ResIII
AAA_10
FtsK_SpoIIIE
AAA_30
Zot
AAA_19
P-loop_TraG
CbiA
AAA_11
Zeta_toxin
T2SSE
AAA_7
AAA_6
SRP54
PHA01746
RF-1
Motif
Other DBs
NCBI-ProteinID:
QDO93866
UniProt:
A0A516GQT2
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All DBs
Position
complement(1747446..1748963)
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AA seq
505 aa
AA seq
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MTTNDAFLKEITEGNTFKGDYITMGSAILNENPLKNAYVNIPLKTLNRHGLIAGATGTGK
TKTLQVMAEQLSDQGIPVLLMDIKGDLSGLAKPGVSNNFIETRHEKIGLEYTTKGFPVDV
LTLSHQDGVRLRATVSEFGPILLSRILDLTDTQSGIVSVIFKYCDDNKLPLLDLKDFKKI
LQYATQEGKAEFQEAYGRISTASTGAILRKVVELEQQGADLFFGETSFDVQDLTRIDSDG
RGYINILRLTDIQDKPKLFSTFMLSLLAEIYTTFPEQGDSGRPELVIFIDEAHLIFSEAS
KALLNQIESIVKLIRSKGVGLYFVTQNPTDVPEAVLGQLGLKIQHALRAFTAKDRKAIKL
TAQNYPDSAYYDTESVLTNLGTGEALISALDEKGRPTPLAATMMRAPMSRMDILTDTELS
ELISESKLVKKYNQTIDRESAYEILTDKINRAEAEAEKEAEREEQRSKKTTSRRKSTVMN
PIVKVLTSATFIRSVFGILTKVMKK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacgacgcttttttgaaggaaataactgaaggaaatacatttaaaggagat
tatattactatgggatctgccatattaaatgaaaaccccttaaaaaatgcctatgtaaat
atacctttaaaaacgttaaacagacatggtttaattgccggtgctacaggtacaggtaaa
actaaaactttacaagtcatggcagaacaactttctgaccaaggcattcctgttttatta
atggatattaaaggggatttaagcggattagctaaacctggtgtaagcaataattttatt
gagacacgccatgaaaaaattggacttgaatacactactaaaggttttcctgtagatgtc
cttaccctttctcaccaagacggcgttagacttcgcgccactgttagtgaatttggacca
attttactctcgagaatcctagacctaacagacacccaatctggtattgtctctgttatt
tttaaatattgcgacgataataaattaccattacttgatttaaaagattttaaaaaaata
ttacaatatgcaactcaagaaggtaaagcagaattccaagaagcctacggaagaatctcg
acagcatccaccggtgctattttaagaaaagttgtagaactagaacaacaaggtgccgat
ttattttttggagaaacatcttttgatgttcaggatttaacgcgaattgatagtgatggt
cgcggatacattaatattcttagacttacagatattcaagacaaaccaaaattgttctca
acctttatgttaagtttattagcagaaatttacactacttttccagaacaaggggatagt
ggcagacctgaattagttatttttattgatgaagcgcatcttatttttagcgaagcttct
aaagcactactaaaccaaatagaaagtattgttaagttaatacgtagtaaaggtgttggt
ttatattttgtaacgcaaaatcctacagatgttccagaagctgtattggggcaattagga
ttaaaaatacagcacgcgttacgtgccttcacagccaaagaccgtaaagcaattaaatta
accgctcaaaactatccagattctgcttattacgatacagaaagcgtacttactaattta
ggaacaggagaagctttaatttctgctttagatgaaaaaggaaggccaactccattagca
gcgactatgatgcgcgctccaatgagccgtatggacatcttaacagatactgaattatct
gagctaatttcagaatctaaattagtaaaaaaatacaaccaaaccattgacagagaaagc
gcttacgaaattttaaccgacaaaataaatcgtgctgaagcagaggctgaaaaagaagcc
gagcgtgaagaacaacgctcaaaaaaaacaacatccagacgtaaaagcacggtcatgaac
ccgatagtaaaagtgttaacgagcgcaacttttattagaagtgtttttggaattttaact
aaagtgatgaaaaaataa
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