Formosa sediminum: FNB79_08070
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Entry
FNB79_08070 CDS
T06103
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fop
Formosa sediminum
Pathway
fop00300
Lysine biosynthesis
fop00470
D-Amino acid metabolism
fop01100
Metabolic pathways
fop01110
Biosynthesis of secondary metabolites
fop01120
Microbial metabolism in diverse environments
fop01230
Biosynthesis of amino acids
Module
fop_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FNB79_08070 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FNB79_08070 (lysA)
Enzymes [BR:
fop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FNB79_08070 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QDO93942
UniProt:
A0A516GQY9
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All DBs
Position
complement(1833053..1834258)
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AA seq
401 aa
AA seq
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MNNNTLLKIASDFGSPVYVYDSEKIETQYKRLTSAFNKVKQLKVNYAVKALSNLTILKLM
KNLGAGLDTVSIQEVQLGLKAGFSADQIIFTPNGVSLEEIEEASKLGVQINIDNLSILEQ
FGTKHPKIPVCIRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTGMHINGIH
MHTGSDILDIDVFLYASEILFDTAKHFKDLEFLDFGSGFKVPYSKGDIETNIEEFGTKLS
KRFNEFCKEYGKELTLGFEPGKFLVSESGVFLAKVNAVKQTTSTVFAQIDSGFNHLIRPM
FYGSQHVITNISNPKGRERFYSVVGYICETDTFANNRRINEITEGDVLAFQNAGAYCYSM
ASNYNSRFRPAEVLWHKDKALLIRERETFEDIIRNQVEVTL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacactttattaaaaattgcaagcgactttggaagtccggtgtatgtgtat
gactctgaaaaaatagagacacaatataaacgtttaacttctgcttttaataaggtgaaa
cagctaaaggttaattatgcagttaaagcattatctaaccttactatcttaaaattaatg
aaaaatcttggagcaggacttgatacggtctctattcaagaagttcaattaggattaaaa
gctggcttttctgcagatcaaattatctttactcctaacggtgtatctttagaagagatt
gaagaagcttctaaattaggcgtacaaataaatatagacaacctttctattttagaacaa
tttgggacaaaacacccaaaaataccagtatgtattcgtattaacccgcatgttatggct
ggaggaaatgctaacatatctgtaggccatatcgattctaaatttggaatttctgtacat
caaattcctcatatcttaagaattgtagaaaatacaggtatgcatataaacgggattcat
atgcatacaggaagtgatattttagatattgatgtctttttatatgctagcgaaatttta
tttgatacagctaaacattttaaagatttagagtttttagattttggttctggttttaaa
gtcccatactctaagggagatattgaaacaaatattgaagaatttggcactaaactttct
aaacgttttaatgaattctgtaaagaatacggaaaggaattaaccttaggtttcgaacca
ggaaaatttttagtgagtgaatctggagtgtttttagctaaagtaaatgctgtaaaacaa
acaacatctacagtatttgcacagatagactctggttttaaccatttaattcgtccgatg
ttttacggatctcaacatgttattacaaacatttcaaacccgaaaggtcgcgagcgtttt
tactctgttgtaggttatatttgtgaaaccgatacttttgctaacaaccgtagaattaat
gaaattacagaaggagatgtccttgcattccaaaatgcaggagcctattgttactctatg
gcttcaaactataattcacgttttcgacctgctgaagtactttggcataaagacaaagcc
ttattaattagggagcgtgaaacctttgaagatattattagaaaccaagtagaagttact
ttataa
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