Formosa sediminum: FNB79_09045
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Entry
FNB79_09045 CDS
T06103
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fop
Formosa sediminum
Pathway
fop03030
DNA replication
fop03430
Mismatch repair
fop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNB79_09045
03430 Mismatch repair
FNB79_09045
03440 Homologous recombination
FNB79_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fop03032
]
FNB79_09045
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_09045
Enzymes [BR:
fop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNB79_09045
DNA replication proteins [BR:
fop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNB79_09045
DNA repair and recombination proteins [BR:
fop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNB79_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QDO94119
UniProt:
A0A516GRI4
LinkDB
All DBs
Position
complement(2066066..2067433)
Genome browser
AA seq
455 aa
AA seq
DB search
MMYTIIDIETNGSGNKITEIAILKHDGKQLIDTFSTLVNPETQIPPYITTLTGIDNRMVA
NAPTFSEIAQQVLDLTEDSIFVAHNVNFDYNIIRNAFKELGIEFKRKKLCTIRLSRKLIP
GHQSYSLGKLCDALNINVVNRHRAKGDAEATVILFELLLAKEESETVIKAFLKPSSKEAT
LPPNLPNTVFNAIPNKPGVYYFKNKKGKIIYVGKAKDLKKRVLTHFYNKSDKEMNLCRET
ADITFDLSGSELIASLMEDAAIKSHYPEYNQAAKRNPKAFAIFSYEDRDGIKHLAYNTLK
SAPNPLKIFYSITDCRLQLEKYCTAFNLCPKYCHLQESITACSHYAIQDCKGICKQKETA
SNYNLRVEEAIASIKNSNQELVIKQNGRHQEESAFILIRDGFYKGYGFIDATEQIMHTED
LERFLIPQQDTMHTQKILQSVILKTQIQPQSSVSI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ataatgtacacaattatagatattgaaactaacggaagcggtaataaaattacagaaatt
gcgattttaaaacatgacggcaaacaacttatagacacgtttagcacattggtaaatcct
gaaactcaaataccgccatacattactacgcttacaggtatagacaatagaatggttgct
aacgcccctactttttcagaaattgctcagcaagtattagatcttacagaagattctatt
tttgttgcccataatgtgaatttcgattataacattattcgtaatgcttttaaagagctt
ggtattgagtttaaacgcaaaaaattatgtaccatacgtttatctagaaaattaattccg
ggacaccaatcatacagcctaggtaaattatgcgacgcccttaatataaatgttgtgaac
aggcaccgtgctaaaggagatgcagaagcaactgtaattttatttgaattattattagcc
aaagaagaatcagaaacagttataaaagcctttttaaaaccttcttctaaagaagcaact
ctccctccaaatttgcctaatacagtatttaacgctatacctaataaacctggagtttat
tattttaagaataaaaaaggaaaaataatatatgttggaaaagctaaagatttaaaaaaa
cgtgtattaactcatttttacaataaatcggataaagaaatgaatttgtgcagagaaaca
gcagatatcacttttgacttatctgggagtgaattgattgcgtcacttatggaagatgct
gctataaaatctcattatccagaatataatcaagcagcaaagcgtaatccaaaagctttc
gcaatttttagttatgaagacagagacggcataaaacacttggcatataacactctaaaa
tctgctccaaatccacttaaaattttctactccattacagattgcagactacaattagaa
aaatactgtacagcttttaatttatgtcctaaatattgtcatttgcaagaaagtattacc
gcatgttcccattacgccattcaagactgtaaaggtatatgtaaacaaaaggaaacggct
tcaaattataacttgagggtagaagaagctatcgcatctataaaaaatagcaatcaagaa
cttgtaattaaacaaaacggcagacatcaagaagaatctgcatttattttaattagagat
ggattttacaagggctatggttttatagacgctaccgaacagattatgcacactgaagat
ttagaacgttttttaatcccacaacaagatactatgcacactcaaaaaattttacaaagc
gttattttaaaaactcaaatccaacctcagtcgagtgttagcatttaa
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