Formosa sediminum: FNB79_09100
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Entry
FNB79_09100 CDS
T06103
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fop
Formosa sediminum
Pathway
fop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FNB79_09100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_09100
Transporters [BR:
fop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FNB79_09100
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Thioredoxin_2
Motif
Other DBs
NCBI-ProteinID:
QDO94129
UniProt:
A0A516GRJ3
LinkDB
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Position
complement(2076942..2078573)
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AA seq
543 aa
AA seq
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MFSVLNTSLSTFKKYILICFGSIMCICCTTNKKNRDQNLVFRYNEHKNISTLDPAFSKDI
ADIWATNQLFNGLVQMNDSMQVEPAIAKSWSISEDGLTYTFTLKTNIYYHKHALFGRDST
RIVTAHDFAYSFNRLLDPEVGSPGRWVLNKVDTFEAKNKHTFIIRLKQPFPAFLGLLTMK
YCSVVPKEIVEHYGTEFRSHPIGTGPFYFKRWEENIKLVFRKNPLYFETNNYGQHLPYLE
AVAITFLPDKQSEFLQFAQGNIDFISGLDASYKDEILTANGQLRDQYEPEVNLIRAPYLN
TEYLSFFMDSELTEIQSEWLRKCINYGFDRKKMMTYLRNGIGIPAHGGFIPKGLPGYNSG
IGFNYNPKLAKSYLETFKTEKGIEHPEITITTTGNYLSFCEYIQREIQKIGLIVHINVVP
PSALKDAKANGKLDIFRASWVADYPDAENYLSLFYSKNFAPNGPNYSHFKNDLFDRWYEQ
SFVETDTKTRELLYTKMDSLVMAHAPVVPLFYDEVVRFTRKEVHNLGINPTNLLDLKRVK
KYN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagttttaaatacttctctttctacttttaaaaaatatattcttatctgtttt
ggaagtataatgtgtatttgctgtacaaccaacaaaaaaaatagagaccaaaatcttgta
tttagatataacgaacacaaaaatataagtactttggatcctgcgttttctaaggacatt
gcagatatctgggcaaccaaccaattatttaatggtttagtgcagatgaatgatagtatg
caagtagaacctgcaattgcaaaatcttggtctatttccgaagatggactaacttatacc
tttaccttaaaaacaaatatttattaccacaaacacgctttatttggaagagattctaca
cgtatagtgactgcgcatgattttgcatacagctttaaccgcttattagatcctgaggta
ggctcgccaggacgatgggtattaaataaagtagacacttttgaagctaaaaataaacac
acgtttataattcgtttaaaacaacctttccctgcttttttaggattacttactatgaag
tattgttcggtagttcccaaagaaattgtagaacattacggaactgaatttagatcacac
ccaatagggacaggaccattttattttaaacgctgggaagaaaatataaaattagttttc
agaaaaaaccccttatattttgaaaccaataattatggtcagcatttgccttatttagaa
gctgttgctataacttttttacctgacaaacaaagtgaatttttacaatttgcacaaggt
aatattgattttatttcgggactcgatgcctcgtataaagatgaaattttaacagcaaat
ggccagctacgagaccaatacgagccagaagtaaatttaattcgtgctccgtatttaaat
acggaatacttatcgttttttatggattcagaacttactgaaatccaatcagaatggctt
agaaaatgtattaactatgggtttgaccggaaaaaaatgatgacttatttacgaaatggt
attggtattcctgctcacggcggctttatacctaaaggtttaccaggttataattcgggg
attggatttaactataatccaaaattagcaaaaagttaccttgaaacgtttaaaaccgaa
aaaggaattgaacatcccgaaatcacgataactacaacaggaaattatttaagtttctgt
gaatatatacaacgagaaatacagaaaataggactaatagtacacataaacgttgtgcca
ccttcggctttaaaagacgctaaagctaacggaaaacttgatatttttagagcgagttgg
gttgccgattaccccgatgcagaaaattacttatcgttattttacagtaaaaattttgcc
cctaatggccctaactattcgcattttaaaaacgacttatttgatagatggtacgagcaa
tcttttgtagaaacagataccaaaacacgagagttactctatacaaaaatggactcttta
gttatggcacatgcccctgttgtaccattattttatgatgaagttgttagatttacacga
aaagaagttcataatttaggtataaatccaaccaatttgttagacttaaagcgcgttaag
aaatacaactaa
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