Formosa sediminum: FNB79_11050
Help
Entry
FNB79_11050 CDS
T06103
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fop
Formosa sediminum
Pathway
fop00061
Fatty acid biosynthesis
fop00071
Fatty acid degradation
fop01100
Metabolic pathways
fop01212
Fatty acid metabolism
fop02024
Quorum sensing
fop04146
Peroxisome
Module
fop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FNB79_11050
00071 Fatty acid degradation
FNB79_11050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FNB79_11050
09145 Cellular community - prokaryotes
02024 Quorum sensing
FNB79_11050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fop01004
]
FNB79_11050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fop04147
]
FNB79_11050
Enzymes [BR:
fop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FNB79_11050
Lipid biosynthesis proteins [BR:
fop01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FNB79_11050
Exosome [BR:
fop04147
]
Exosomal proteins
Exosomal proteins of breast milk
FNB79_11050
Exosomal proteins of breast cancer cells
FNB79_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QDO94478
UniProt:
A0A516GSK0
LinkDB
All DBs
Position
complement(2557701..2559497)
Genome browser
AA seq
598 aa
AA seq
DB search
MNYKHLVEEIKENSLRYKHKNAIYYKNNERNTWEGISWLDFESRINALAKALINHGIAVQ
QNVAIFSENMPNWIIADCAIMRVRAVTIPIYATNSKKEAEYVINDAEVNLLFVGDQNEYD
KAYELLQTSKHLKLIVALTKTITLHEPNKSVYLEDFVNFEASEHVNIELQKRIYECEYED
IASIIYTSGTTGEPKGVMLDYTNFGGSLVAHDYELNVSEQDVSLSFLPLSHIYERSWVFF
CLKKGIEVYFNQDPKKIVDVIKEVKPTLMCTVPRIFEKIFAAIQDKRKEASPTKMKLASW
ALGIGNNYYNKHKRLEKQIPLALKLKYKIADKLVLSKLREVFGGRIKFMPCGGAPLAADL
VSFFHSFGLNVKCGYGLTETTATATLFGDTHFEFNSAGKPIEGSQVKIGHNNEILIKGPG
VMKGYYKKPEATAEVFEKGWFKTGDAGKIDSKGNLIITDRIKDLMKTSGGKYIAPQKLEN
ALITDSFIEQIAVIGDQQKYVTALAVPSFDNLKKYALEHKINFKDIEDLISNSQIITLFE
KRFEELQKEFSKFEKIKKFTLLPKEFSIETGEITATLKLKRKVIQQKHKALIDKMYSE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaacacttagtagaagaaattaaagaaaatagtctgcgttataaacataaa
aacgcgatttattataaaaataatgagcgtaatacctgggaaggtatttcttggttagat
tttgaatcacgtataaatgccttagcaaaagctcttattaatcatggaatagcagtacaa
caaaacgttgctatcttttcagaaaacatgcctaattggattattgcagattgtgctatt
atgcgtgttagagctgttactattcccatttatgcaacaaattcaaaaaaagaagctgaa
tatgttattaatgatgctgaagtaaatttgttatttgttggagaccaaaatgaatacgat
aaagcttacgaattattacagacctctaaacatttaaagttaattgtagcgttaactaaa
accattacgttacatgagcctaacaagtctgtttatctagaagattttgtcaattttgaa
gcttctgaacacgtgaatatagaacttcaaaaaagaatttacgaatgcgaatatgaagac
attgctagtataatttatacctctggaacaactggagaacctaaaggagttatgttagat
tatactaattttggcggttctttagtcgctcatgattacgaattgaatgtgtctgaacaa
gatgtttcactaagttttttacctctaagtcatatttacgaacgtagttgggtattcttc
tgtttaaaaaaaggtatagaagtatactttaatcaagatcctaaaaaaattgtagatgtt
ataaaagaggtaaaacccaccttaatgtgtacggtccctcgcattttcgagaaaattttc
gcagccatacaagataaaagaaaagaagcctcacctactaaaatgaaacttgcaagttgg
gctttaggtatcggaaacaattactacaataagcataaacgcctagagaaacaaatccct
ttggcgcttaaactaaaatataaaattgcagacaaattagtattaagtaaattaagagag
gtctttggcggacgtataaaattcatgccgtgtggtggtgcacctttagctgcagatctt
gtatcgttctttcattctttcggacttaatgtaaaatgtggatatggtttaactgaaaca
actgcaactgctaccctatttggagatacacattttgaatttaattctgctggaaaacct
attgaaggctctcaagttaaaataggacataacaatgaaatactaattaaaggtccagga
gtaatgaaaggctattataaaaagcctgaagctactgcagaagtatttgaaaagggttgg
tttaaaactggagatgctggtaaaatagattctaaagggaatttaataatcacagacaga
attaaagatttaatgaaaacttcgggtgggaaatatattgcgcctcagaaattagaaaat
gctttaattacagattcgtttatagagcaaattgctgttattggcgatcagcaaaaatat
gtaacagcgcttgctgttcctagttttgacaacttaaagaaatacgcacttgaacataaa
attaactttaaagatattgaagatttaattagtaacagtcagattattacactgttcgaa
aaacgttttgaagaacttcaaaaagagttttctaaattcgaaaaaattaaaaaattcacc
ttattacctaaagaatttagtatagaaacgggtgagatcacagcaactttaaaattaaaa
cgaaaagtcattcaacaaaaacacaaagcgctcatagataaaatgtattcagaataa
DBGET
integrated database retrieval system
