Formosa sediminum: FNB79_12580
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Entry
FNB79_12580 CDS
T06103
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fop
Formosa sediminum
Pathway
fop03030
DNA replication
fop03430
Mismatch repair
fop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNB79_12580
03430 Mismatch repair
FNB79_12580
03440 Homologous recombination
FNB79_12580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fop03032
]
FNB79_12580
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_12580
Enzymes [BR:
fop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNB79_12580
DNA replication proteins [BR:
fop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNB79_12580
DNA repair and recombination proteins [BR:
fop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNB79_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DUF6837
Motif
Other DBs
NCBI-ProteinID:
QDO94763
UniProt:
A0A516GTB6
LinkDB
All DBs
Position
complement(2878936..2879601)
Genome browser
AA seq
221 aa
AA seq
DB search
MKWLFNKNENSYPDYWTRYNACFLDAKPIDINTATYVVLDTETTGFNYDKDKILCIGAVK
IIDGSIDISTAFEIYIKQDYFDEDSVKIHGIIKNERIETVSEEEAVVMFLEYIEDAILVA
HHAFYDITMINKALQRLELPKLKNSVVDTMFIYKATRTNSTTIDAKKKYTLDELAENYDI
DLSDRHNAAGDALITALAFIKAVSFLVKNKNYTLKELLTHK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctttttaataaaaatgagaactcgtatcctgactattggacgcgttataat
gcttgttttttagatgctaagccaatagatataaatacagctacatatgttgttctagat
acagaaactacaggttttaattacgacaaagataaaattctttgtataggagccgttaaa
attattgacggaagtatagatattagcacggcttttgaaatctacattaaacaagattat
tttgatgaagatagtgttaaaattcacggcataatcaaaaatgaaagaatagaaacggtc
tctgaagaagaggccgttgttatgttcttagaatatatagaagatgccattttagtcgcc
catcatgccttctacgatattaccatgataaataaagctctgcaacgtttagagcttcca
aaattaaaaaacagtgtagtagatacgatgtttatttacaaagcaactcgtaccaactca
actactatagatgcaaagaaaaagtatactctagacgaattagcagaaaattatgatatc
gatttaagcgatagacataatgctgctggagatgctttaattacagcacttgcttttata
aaagctgtttcttttttagttaaaaataaaaattacacattaaaagagttattaactcat
aaataa
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