Formosa sediminum: FNB79_12950
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Entry
FNB79_12950 CDS
T06103
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
fop
Formosa sediminum
Pathway
fop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FNB79_12950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_12950
DNA repair and recombination proteins [BR:
fop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FNB79_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_22
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QDO94834
UniProt:
A0A516GTH8
LinkDB
All DBs
Position
complement(2954629..2956794)
Genome browser
AA seq
721 aa
AA seq
DB search
MINIHQKTLQDLEFQTVLEQVSEYCITALGHQSALEILPLKHKEDVLHELQLTHEYVSSF
YNDNRIPNHGFDDISKELKLLKIENTFLEVHSLKKIVTISQTTNEIIVFLKKFEDYYPNL
YASASHIEITKVIIEKINAIVDRFGEIKNNASPLLYELRQSMSKLKGQINASFTSALNMY
QSFEYLDDIRESVIENKRVLAVKAMYRRKVKGSIMGSSKTGSIVFIEPEATLKYTRELHN
LQYEEKEEIVKILKDLTNFIRPFLGLLHDYQAFLIKIDLIAAKSHYAKSINAILPEITEE
RSMFLRDAYHPLLYLTNSKQGKTTYPQTITLNEDNRIIVISGPNAGGKSITLKTVGLLQV
MLQSGMLIPVHERSKTYIFDRVLSDIGDNQSIENHLSTYSYRLKQMNYFLKKCNSKTLFL
IDEFGTGSDPELGGALAETFLEEFYEREAYGIITTHYSNLKILANELPHMQNANMQFNNK
TLEPIFKLVLGQAGSSFTFEVAQKNGIPYSLINKAKKKIERSKVRFDATIAKLQKERTKL
EKTERSLKVNEQKKLSEAEKLEEINTKIQKKLESYQELYDSNQRLIYLGQKLNDISEKYF
ENKRKKDLFEEVFKVVQIENSKRKRISAKQKKIQKAKEQKVVKEAEKKVEVIRQKKKIAK
QKAIEAPKPKVTLKLGDRVRMIDGKAIGTIDTIEKNKAIVNYGIFTTNVDLNQLELVEAK
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgataaacattcaccagaagaccttacaagatttagagtttcaaactgttttagaacaa
gttagtgagtactgtatcactgctttgggacatcaatcagcattagaaatattaccatta
aagcataaagaggacgtgttgcatgaacttcagttaacacatgagtacgtatcgtctttt
tataatgataaccgaattcctaatcatggtttcgatgatatttctaaagaattaaaactt
cttaaaattgaaaacacgtttttagaagttcatagcctaaaaaaaattgtaacaatttct
caaacgactaacgaaattatagtattcctaaagaaatttgaagactactaccctaactta
tatgcgagtgcgtcacatatagaaattactaaagtgattattgaaaagataaatgctata
gtagatcgttttggtgaaataaaaaataatgcatcacctttactttacgagttaaggcag
tctatgagtaaattaaagggacagataaatgctagttttacttcggctttaaacatgtat
caaagttttgaatatttagatgatattcgagaatccgtaatagaaaacaaacgtgttttg
gcagtaaaagccatgtacagacgtaaggttaagggctccataatgggaagtagtaaaact
ggaagtatagtgtttattgagcccgaagcgactttaaaatatacacgagaattacataat
ttacagtacgaagagaaagaagagattgtaaaaattcttaaagatttaaccaattttata
cgtccgtttttaggattacttcatgattatcaagcctttttaattaagatagatcttatt
gctgcaaaatcacattatgcaaaatctattaatgcaattttacctgaaattacagaagaa
cgtagcatgtttcttcgcgatgcttatcacccattattatatttaacaaattctaaacaa
ggaaaaaccacctatccgcaaaccataacattaaacgaagacaacagaattattgtaatt
tcaggtcctaatgcaggaggaaaaagtattactttaaaaacagttggacttttacaagtt
atgttgcaaagtggtatgcttattccggttcatgaacgtagtaaaacgtatatttttgat
cgtgtgttaagtgatattggagataatcaatctatagaaaatcacttaagtacatacagt
tacaggttaaaacaaatgaactattttttaaaaaagtgtaatagtaaaacactgttttta
atagatgaatttggtacaggatcagaccctgaactaggaggtgcacttgcagagacattt
ttagaagaattttatgaacgtgaagcttacggaattataaccacccactactctaaccta
aaaattttagcaaacgaattgccgcatatgcaaaacgcaaacatgcaattcaacaataaa
accttagaacctatttttaaattggttttaggacaagcaggtagctcttttacgtttgaa
gttgctcaaaaaaatggcattccctatagtttaattaataaagcgaaaaagaagatagaa
cgcagtaaagtgagatttgatgcaactattgcaaaacttcaaaaagagcgaaccaaatta
gagaaaacagaacgttcgttaaaagtaaacgaacaaaaaaaattgtctgaagcagaaaaa
ttagaagaaataaataccaaaatacagaaaaaactagaaagctatcaagagttatacgat
agtaaccaacgtttaatttatctgggacaaaaacttaatgatatttctgaaaaatacttt
gaaaacaagcgtaaaaaagacctgtttgaagaggtgtttaaggtcgtacaaattgaaaac
tctaaacgtaaacgcatctctgctaaacagaaaaaaattcaaaaagctaaagaacaaaaa
gtagttaaagaggctgaaaaaaaagtagaagttatacgccaaaaaaagaaaatagcaaaa
caaaaagctatagaagctcctaaacctaaagttactttaaaattaggagatcgcgtgcgt
atgattgatggtaaagccattggtacaattgatactatagaaaaaaacaaagccatcgta
aattatggtatctttactactaatgtggatttgaatcaattagaactcgtagaagctaaa
aaataa
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