Formosa sediminum: FNB79_12960
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Entry
FNB79_12960 CDS
T06103
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fop
Formosa sediminum
Pathway
fop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNB79_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fop03400
]
FNB79_12960
Enzymes [BR:
fop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FNB79_12960
DNA repair and recombination proteins [BR:
fop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FNB79_12960
Prokaryotic type
FNB79_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDO94836
UniProt:
A0A516GTI3
LinkDB
All DBs
Position
2958424..2959089
Genome browser
AA seq
221 aa
AA seq
DB search
MEKNINSDWVDLLETEFEKPYFKTLWNFVEDEYALHTCYPPKSEIFNAFNTCAFKDVKVV
ILGQDPYHGPGQANGLCFSVADGIPHPPSLKNIFKEIETDLGTPYPASGNLDRWATQGIL
LLNATLTVREHEAGSHQNKGWEIFTDQIISLISSKKQNVIFLLWGGYAKKKIKLIDTTKH
NALTSGHPSPLSANRGYWFGNNHFSKTNSLLLHNTQAEIQW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatataaattcagattgggttgatttattagaaactgaatttgaaaaaccc
tattttaaaaccttgtggaattttgttgaagatgaatatgctttacatacgtgctaccca
ccaaaatctgaaatttttaacgcattcaatacgtgtgcctttaaagatgtaaaagtagtt
atattagggcaggacccgtatcacggaccgggacaagccaatgggttatgtttttctgta
gcagatggcataccacatccgccttctttaaaaaatattttcaaagaaattgaaacagat
ttaggcacaccttatcctgctagcggaaatcttgatcgctgggcaacacaaggtatatta
cttttaaatgcaacgcttactgtacgtgaacatgaagctggtagccaccaaaacaaaggt
tgggaaatatttacagatcagataatttcattaataagttctaaaaaacagaacgttatt
tttttattatggggcgggtatgctaaaaagaaaataaaattaattgatacaactaagcac
aacgcccttacatcaggacatccatcacctctgagtgcaaacagagggtattggtttgga
aataatcactttagtaagactaactccctgttgctgcataatacacaggctgagattcag
tggtag
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integrated database retrieval system
