Formosa sediminum: FNB79_13770
Help
Entry
FNB79_13770 CDS
T06103
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fop03016
]
FNB79_13770
Enzymes [BR:
fop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FNB79_13770
Transfer RNA biogenesis [BR:
fop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FNB79_13770
Prokaryotic type
FNB79_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1398
STAT2_C
Motif
Other DBs
NCBI-ProteinID:
QDO95732
UniProt:
A0A516GW51
LinkDB
All DBs
Position
complement(3126236..3126940)
Genome browser
AA seq
234 aa
AA seq
DB search
MIDKTMRYIMDGKPFKTLGSGRTDAMVSAQQGAFELFLEDKIEDEVAFLELFNYNLPQDL
RALSITEVDKHFNVINASKQKEYVYVFAHGIKCHPFCAPFMTTILDPLDIDKMKQGAKLF
EGAHNFKTYCYKPTETGVFNRTIDTCELVKNTLITASFFPEQSYMLRVKGKGFMRNQIRL
MMGALIKLGKHEITLDYIKESLKPESTEVMDYIAPASGLVLNAVEFESITCIQT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgatagacaaaaccatgcgttatattatggatggtaaaccttttaaaacattaggttca
ggacgaacagatgcaatggtgtctgctcaacagggcgcttttgaactgtttttagaagat
aaaattgaagatgaagttgcttttttagaactgtttaattataacttaccacaagattta
agagccttatctattactgaagtcgacaaacattttaatgttataaacgcgtccaaacaa
aaagaatacgtgtatgtatttgctcatggaataaaatgtcatccattttgtgctcctttt
atgacgacgattttagatccattagatatagataaaatgaaacagggtgctaaacttttt
gagggagctcataattttaaaacctattgttacaaacctacagaaacaggtgtttttaac
agaactatagatacttgcgaattggttaaaaacaccttaataacagcaagttttttccca
gaacaatcatatatgttacgagttaaaggcaaaggttttatgagaaaccaaattcgatta
atgatgggtgcacttataaaactaggtaaacacgaaataacattagactatattaaggaa
agtttaaagccagaaagtactgaagttatggattatatagctccagcttcaggattagtt
ttaaatgccgtagaatttgaatcgattacttgtattcaaacataa
DBGET
integrated database retrieval system
