Formosa sediminum: FNB79_14980
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Entry
FNB79_14980 CDS
T06103
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_14980
Transporters [BR:
fop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNB79_14980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QDO95220
UniProt:
A0A516GV05
LinkDB
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Position
complement(3415575..3417116)
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AA seq
513 aa
AA seq
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MIRNIFKINLWINLSVIVLSACTIVSCSNLEEDPSEVQLGESTLTSDDALEAVVTGMYRE
LMEGGAQWAQFQLAAFGGDDLTTHSASNKIAYRESDWRRQTSNTENIEMAYNTCYDVITL
ANIALDAQDNIISTDQSKVDRLIGEAYFMRAFSYMHLTKTYGRIPIQLVSNSNEDLPKAT
FLDIYSQIESDLLYAEALLPDVYPDVAVVGSRPSNGTAKAFLARLYLMWGGYPIKDESKY
ALAAEKAKEVIDNEGTYGFGLHSNFRELWTEANRFNQNESVFTLVSCTSCGVRNRTMGML
GMPSEAGGWTEIFSEIAFFEDMQEDAIKNGTENRFNDTYVLEAIDRAPSYPVGSEWATWS
DPHPLFRKVVGGDLSEDGSKSTISDYNIYFMRYAEVLLNYAEATGRSGGNDPAAWAALNR
VRNRAGATTELTSEDGTLTELAFLERKWEFAGEYLRMFDLVRTETLSEALANRSPVETVD
IKNNTVPITSGGEEFYFSPIPQSEIDISPGLGD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaaatatttttaaaataaatttatggattaatttaagtgtaatagtgctttct
gcatgcactattgtgtcttgctctaatcttgaagaagatccttcagaggttcagttagga
gaatctacacttacatcagatgatgctttggaagctgttgtaactggtatgtatagagaa
cttatggaagggggcgcacaatgggctcaatttcaattagcagcttttggtggggatgat
ttaaccacacatagtgcaagtaataaaattgcttatagagaatcggattggagaagacaa
acttctaataccgaaaatatagaaatggcttataacacttgctatgatgtgataacttta
gcaaacatagctttagacgcccaagataatataattagtacagatcaatctaaagtcgat
agattaattggagaagcttattttatgagagctttttcatacatgcacttaactaaaacg
tatggtagaatcccaattcaattggtatcaaattctaatgaagatttgccaaaagctact
tttttagatatttattcacagattgaatcagatttactttatgcagaagcattacttcca
gatgtttacccagatgtagcagtggttggttcaagaccaagtaatggtactgcaaaggct
tttttagctagattatatttaatgtggggaggttatcctattaaagatgaaagcaaatac
gctttagcagctgaaaaagcaaaagaagtgattgataatgaagggacttatggttttgga
ttacatagtaattttagagaattatggacagaagccaatcggttcaatcaaaatgaaagt
gtgtttactttagtaagttgtacaagttgtggggtaagaaacagaactatgggaatgtta
ggtatgccttctgaagctggtggatggactgagatattcagtgagattgcattttttgaa
gatatgcaagaagatgctataaaaaacggaacagaaaacaggtttaatgatacttatgtg
ttagaagctatagatagagctccttcttatccagtaggatcagaatgggccacttggtct
gatcctcatcctttatttagaaaagttgtaggaggagatttgtctgaagacggttcaaaa
agtacaatctcagattataatatatattttatgcgttatgcagaagtcttactaaattat
gcagaagcaacgggaagatcaggcgggaatgatccagccgcatgggctgctttaaatcgc
gttagaaaccgggctggtgcaactacagaactcacaagtgaagatggtacactaacagaa
cttgctttcttagaaagaaaatgggaatttgcaggtgaatatttaaggatgtttgattta
gttagaacagaaacactttcagaagcactggcaaataggtctcctgtagaaactgttgat
ataaaaaacaataccgttccaataacaagtggaggagaagagttttatttttcaccaatt
cctcaaagcgaaattgatatttctccaggattaggagattaa
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