Formosa sediminum: FNB79_16475
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Entry
FNB79_16475 CDS
T06103
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fop02000
]
FNB79_16475
Transporters [BR:
fop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNB79_16475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_8
RPN2_N
Motif
Other DBs
NCBI-ProteinID:
QDO95499
UniProt:
A0A516GVF3
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All DBs
Position
complement(3769317..3770774)
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AA seq
485 aa
AA seq
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MKHIYRILFALITIFTFNSCDDYLDIEPKGYTIPETYNDFALLLNESSLSTMDEMGYTIL
LTDDAEKTTDPSYPSSSLLSNLSEKNLNYYYFNPGPTFPQGQDDGYYVQAYSQIYTYNVV
INNIMDVTDATEESKSVTKAEAMFSRAFNYFKLVNFYGKAYDPATASTDYGVPIILDEDI
NAEYVRNSVEEVYDFIINDLIEATPLLEDYTLNIFHPTQMSGNLLLSKVYLFKGDYENAL
TYANLALEDKAASPFELQDLTQYYTVKAGWYSRLIDSRTGEPMLDPIDIPENMYLKTSLY
YFNQTLASDELMDTYRLNLPEGAVDKREDLYFATDELWTSETRVYEFPGSTMYYAVTERN
SGMLLSELYLILAELEARIGSKDKAMEYLDYLRNYRIVGNEPLVAATNAEALKIVLDERR
REFSFNADFRFQDLKRLNTESEFAKTVTHTVDGVDYTLPPNDPRWILPLPHSVIEYNPDI
PVYDR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatatatagaatattattcgcgttaatcaccatttttacttttaattcttgt
gatgattatttagacatagaaccaaaaggatatacaatacctgagacctataatgatttt
gctttactattaaatgagtcatctctttctactatggatgaaatgggatacacaattttg
ttaacagacgatgcagagaaaactacagatcctagttatccaagttcatcacttttatca
aatcttagtgagaaaaatctaaattattattattttaatcctggaccaacatttcctcaa
ggacaggatgatgggtattacgttcaagcctattctcaaatatacacctataatgttgtt
attaataatattatggatgttacagatgctaccgaagaaagcaaatcagtcactaaggct
gaagccatgtttagcagagcatttaattattttaaattagtaaatttttatggtaaagcc
tatgatcctgctacagcaagtacagattatggagttcctattattttagatgaagatatt
aatgcagaatatgttagaaattctgtggaggaagtttatgattttatcattaatgattta
atagaagctacacctctactagaagactatacgctaaacatatttcatccaactcaaatg
tctggaaatttactattatctaaagtgtatttgtttaaaggcgattatgaaaatgccctt
acatacgcaaaccttgctttagaagataaagccgcttctccttttgagttacaagattta
actcaatattatactgttaaagctggttggtattcaagacttatagattccagaacaggt
gagccaatgttagatccaatagatattccagaaaatatgtatctaaaaacgtcactatat
tattttaatcagacgcttgcatcggatgaactaatggatacttatcgtttaaatttacct
gaaggagctgttgataaacgcgaagatttgtactttgctacggatgaactttggacttca
gaaactagagtgtatgaattccctggatcaacaatgtattatgcagttaccgaaagaaat
tctggaatgttgttgtctgagttatatcttattttagcagaattagaagctaggataggt
agtaaagataaagccatggaatatttagattaccttagaaactatagaattgtaggtaat
gagcctttagttgcagcgactaatgcagaggcgttaaaaattgttttagacgagagaaga
agagagtttagttttaatgccgattttagatttcaagatcttaaaagattgaatacagaa
tctgaatttgctaaaacagtaacgcatactgtagacggtgtagattatacattaccacca
aacgatccaagatggattttaccacttcctcatagtgttatagaatataacccagatata
cctgtatacgatagataa
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