KEGG   Formosa sp. Hel1_33_131: FORMB_00540
Entry
FORMB_00540       CDS       T04465                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
for  Formosa sp. Hel1_33_131
Brite
KEGG Orthology (KO) [BR:for00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:for03016]
    FORMB_00540
Enzymes [BR:for01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     FORMB_00540
Transfer RNA biogenesis [BR:for03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FORMB_00540
 Prokaryotic type
    FORMB_00540
SSDB
Motif
Pfam: Anti-Pycsar_Apyc1 Lactamase_B_2 Lactamase_B Lactamase_B_4
Other DBs
NCBI-ProteinID: AOR27117
LinkDB
Position
complement(52754..53659)
AA seq 301 aa
MKLSILGCYSATPRIIAHTTSQVLETRGHLFLIDCGEGTQVELRRHKIKFNQIKHIFISH
LHGDHYFGLVGLVSTFRLLTRETDLHIYGPKGLKELITLQMKLADSWTNFKLIFHVLSSK
SSELIFEDEKVSVHTIPLDHRIYTNGFLFKEKPYERKLDIDKAEALNINKAYFRKLKQGD
DVVNEEGTLIPNAEVTYDGHQTKSYAFCSDTAYKEDIIPIIKDVDMLYHESTFMDAHEHL
CVKTKHSTAKQAATIALKANAKQLILGHYSTRYGGLEGFKTEANTVFKDVLLADDGKVFD
F
NT seq 906 nt   +upstreamnt  +downstreamnt
ttgaaactttccatactcggttgctacagtgcaactcccagaattatagcccataccacc
tctcaagttttagaaactcgtgggcatttatttttaattgattgtggcgaaggcactcaa
gttgagttgagacgtcataaaatcaagttcaaccagatcaagcacatctttatttctcat
ttacatggtgatcactattttggattggtgggcttagtttccacttttcgattgctaaca
cgagaaacggatttacatatttacggtcctaaaggcttaaaggaattgattaccctccag
atgaaactagcggattcatggactaattttaaattgatttttcatgtattgtcctctaaa
tcatccgaactcatttttgaagatgaaaaagtatctgtccataccattcctttagaccat
cgcatatataccaatggatttttgtttaaagaaaaaccgtatgaacgaaagttagacatc
gataaagccgaagcactcaacatcaataaagcctattttagaaaactcaaacaaggcgac
gatgtggtcaatgaggaaggcactttaattccgaatgcagaggtgacttatgacggtcat
cagactaagagttatgctttttgtagcgatacggcttataaagaggacatcatacccatt
attaaagatgtggatatgttgtatcatgaatccacttttatggacgctcacgagcactta
tgcgtcaaaacaaagcattctacggccaaacaagctgccaccattgcattgaaagccaat
gccaaacaattgatcttaggacattactccacacgttacggagggttagaaggatttaaa
acagaagcaaatacggtttttaaagacgtattgcttgcggatgacgggaaagtatttgac
ttttag

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