Formosa sp. Hel1_33_131: FORMB_04930
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Entry
FORMB_04930 CDS
T04465
Name
(GenBank) general secretion pathway protein GspD
KO
K02666
type IV pilus assembly protein PilQ
Organism
for
Formosa sp. Hel1_33_131
Brite
KEGG Orthology (KO) [BR:
for00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
for02044
]
FORMB_04930
02035 Bacterial motility proteins [BR:
for02035
]
FORMB_04930
Secretion system [BR:
for02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
FORMB_04930
Bacterial motility proteins [BR:
for02035
]
Pilus system
Pilus assembly proteins
FORMB_04930
SSDB
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Paralog
GFIT
Motif
Pfam:
Secretin
Secretin_N
FecR_C
DUF6625
GIS3_helical
Motif
Other DBs
NCBI-ProteinID:
AOR27547
LinkDB
All DBs
Position
550220..552439
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AA seq
739 aa
AA seq
DB search
MKKIIPIVALLICSFTHAQNPDQRILNIKNQLELLSTEVNGLTENVKTEINVDNITLSNF
LLAVSDVHKVNINVSPELNQISIANNFTDVSVADLLVFLCKEYNLTIDFTGNILSIKQYF
ETPETPEKRVIPITYDPNNQTISIDAKGDSLYDVFKRIMDETGKNLVFSPGLEAKLLTAY
IQQTPFDTAMDNMAFANNLYVEQSKDGFYLFEDNSPSGTTSNSNTSNSGNQRPARSRNSN
FFFNVLNLENQLLEVDFVNTSIADIINDIGNALNIDVFTATPLDQAGMATFKAKSISFDA
LLTKIFEGQTTQTSETSNPNNPNNSNFNNPNQRSLSNVKSSKGSKHFTYKKEGTIYFFGT
ENQLSVREVAIIHLQHRSVELLSDPSGGGSRSSSRNARSQVQNTNTNSRNNTNSNSNQID
NYSNRNREQLNTNSNQSFSNYSSKAEALVNILPDEIKKDLDIKVDYELNSFYVNGPSSNI
GRFKDFISKIDKPVPVILIEVMMIEVNTNAIVETGVSWGIGKEPTTTSGGIYPETDLSLG
AHTINKVIGGFDGFGSFNLGKVIPNFFATIKAMESNGNLKVRSTPKLSTLNGHRARFSNG
QTSYYAVTQRNIYGNDNPQTSEITNYQPIEAELGLTIKPIVSGDGQVTLDIFVIQSSFRG
RISKDAPPDISSREFSSIIRVRDQDIVVLGGLEERRTNNSGSGVPFLSRIPIIKWLFSKR
VREGRKSKLTVLIKPTIIY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataatccccatagttgccttattaatttgcagtttcactcatgcgcaaaat
ccggatcaacgtattttgaacatcaaaaatcagttggaattgttatcaacggaagtgaat
ggattgaccgaaaatgtcaagactgaaattaacgttgacaacatcaccctctccaatttt
ttgttagcggtttcggatgttcataaagtaaatattaatgtgtcgccagaactgaatcaa
attagtatcgcaaataattttacggacgtatccgtcgcagatttactggtatttttatgt
aaagaatacaacttgaccattgattttacaggaaacatcctttcaattaaacagtatttt
gaaacccccgaaacccccgaaaaacgggtcattcccatcacctacgacccaaataatcag
accatttctatcgatgcgaaaggagattcgctttacgacgtattcaaacgcattatggat
gaaactgggaaaaacttagtgttttccccaggtcttgaagctaaattgttgacggcctat
attcaacaaacgccttttgatactgcgatggacaatatggcttttgcaaataatttatat
gtagaacaatcaaaagatgggttttatctctttgaagataattcgcctagcggaacaact
tctaattcaaatacttccaattctggaaatcaacgccctgcaagatcccggaattctaac
ttcttttttaatgtgctcaacttagaaaatcaattgttagaagttgattttgtcaataca
tccattgctgatattatcaatgatattggcaatgccctcaacattgatgtgtttactgca
acacctttagaccaagcaggtatggcgacctttaaagccaagtctatttcttttgatgct
ctattaaccaagatttttgaaggacaaacgactcaaacttccgaaacttcaaatcctaac
aatcctaacaattcaaattttaataacccgaaccaacggtcattatcaaatgtaaaaagt
tccaaaggctccaagcattttacctacaaaaaagaaggcaccatttatttctttggaacc
gaaaatcagttgagtgttcgtgaagttgcgatcattcatttacaacaccgttctgtagaa
ttgctatcagacccaagcggaggcggcagtcgcagcagcagtcgaaacgctagaagtcaa
gtgcaaaataccaatacaaactcaagaaataacacgaattctaattcgaatcaaattgat
aattacagcaatcgtaaccgagaacaactgaataccaattcaaatcaatcctttagtaat
tacagtagcaaagcggaggcattggtgaatattcttccagatgaaattaaaaaagatttg
gacattaaagtggattatgaactcaacagtttttacgtcaatggcccgagcagtaacatt
ggacggttcaaggattttatatctaaaattgacaaacctgtccccgttattttaattgaa
gttatgatgattgaggttaacaccaacgctattgtagaaacaggagtcagttggggcatt
ggaaaagagccaacaaccactagcggtggaatctatccagaaacagaccttagcttaggc
gcacacactattaataaggttattggtggctttgacggctttgggtcttttaacttaggg
aaagtgattcctaattttttcgcaacaattaaagccatggaatccaatggaaatttaaag
gtgcgctccactcccaaactctcaacgctaaatggacaccgtgcgcgattttcaaatgga
caaacctcctattacgccgttacccaacgtaatatttatggtaatgacaatccacaaacg
tctgaaattacaaactaccagcctatagaagcagaattggggctcaccatcaaacccatt
gtttcgggagatggacaagtcaccttggatatttttgtaattcagtccagttttagaggt
cgaatttcaaaagatgcaccgccagatattagctctcgagaattcagttccattattcgc
gtgagagatcaagacattgtcgttttaggaggtctggaggagcgacgaacaaataactca
gggtcgggagttccctttttatcaagaatccccattataaaatggctgtttagcaaacgg
gtacgagaaggtcgtaaatctaaattaactgtgttaatcaaacccaccattatttactaa
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