Formosa sp. Hel1_33_131: FORMB_07020
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Entry
FORMB_07020 CDS
T04465
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
for
Formosa sp. Hel1_33_131
Pathway
for03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
for00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FORMB_07020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
for03021
]
FORMB_07020
03400 DNA repair and recombination proteins [BR:
for03400
]
FORMB_07020
Enzymes [BR:
for01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FORMB_07020
Transcription machinery [BR:
for03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FORMB_07020
DNA repair and recombination proteins [BR:
for03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FORMB_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
AOR27754
UniProt:
A0A1D7XWR7
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All DBs
Position
complement(777698..778690)
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AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVKMD
SVEHEFSTIPGVVEDVTEIILNLKQVRFKRQIDEVDNESVSISISGQDKITAGDFQKFIS
GFQVLNSDLVICNLDPKVTINMELTLEKGRGYVPAEENKKAAASVGTIFTDSIYTPIKNV
KYSVENFRVEQKTDYEKLVFEIQTDGSISPQDALTQAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaattttcagaagcccgacaaagtaattatgatcgactctactgatttc
gaaggtaaattcgaattcagacctttagagccaggatacggattaacagttggaaatgct
ttacgtagagtgttactatcttcattagaaggttttgcaattacttcagttaaaatggac
agtgtagaacatgagttctctaccatacctggtgttgtagaagacgttactgaaattatt
cttaacttgaaacaagtacgtttcaagcgacaaattgatgaagtagacaacgagtctgtt
tcaatatcaatttctggtcaagataaaattactgctggtgattttcagaaatttatttct
ggattccaagttttaaattcagatttagtaatctgtaatttagatcctaaagttaccatt
aacatggaactgactttagaaaaaggacgtggatatgtacctgctgaagaaaataaaaaa
gcagctgcctctgtaggaacaatctttacagactctatttatacaccaatcaaaaatgtt
aaatacagcgttgagaactttcgtgtagaacaaaaaacagattacgaaaaattagttttc
gaaatccagacagacggttctattagtcctcaagatgcattaacacaagcagctaaaatc
ttaattcaccactttatgttattctccgatgagcgtatcactttagaagcggatgagatt
gcacaaactgaaacgtatgatgaagaatcactacacatgcgtcagttgcttaaaactaaa
ttaattgacatggacctttcagttcgtgctcttaactgtttaaaagctgcagaagttgat
actctaggtgacctagtatctttcaacaaaaacgatttaatgaagtttagaaactttggt
aaaaaatcattaactgaactcgaagagttagtcaatgtaaaaggccttagctttggaatg
gacttaagtaaatacaaattagataaagattaa
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