Formosa sp. Hel1_33_131: FORMB_08090
Help
Entry
FORMB_08090 CDS
T04465
Name
(GenBank) peptidase, C39 family
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
for
Formosa sp. Hel1_33_131
Pathway
for02010
ABC transporters
for02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
for00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FORMB_08090
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FORMB_08090
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
for01002
]
FORMB_08090
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
for02000
]
FORMB_08090
Peptidases and inhibitors [BR:
for01002
]
Cysteine peptidases
Family C39
FORMB_08090
Transporters [BR:
for02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FORMB_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
AAA_21
AAA_23
AAA_15
AAA_30
DLIC
DUF87
AAA_16
SbcC_Walker_B
nSTAND3
nSTAND1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AOR27861
UniProt:
A0A1D7XX19
LinkDB
All DBs
Position
880101..882254
Genome browser
AA seq
717 aa
AA seq
DB search
MASIKIKQHDITDCGAACLASIAAHYHLELPIARIRQYAGTDKKGTNVLGLIEAAEKLGF
EAKGVKGVLDSLFKIPKPAIAHIIVKKKLHHYVVIYGVSKSHITVMDPGTGKIDKKTHEA
FLEEWTGVLVILQPNETFKKGNDKISVYKRFWFLLKPHKFVLAQAFFGAIVYTLLGFSTS
IYIQKITDFVLVSGNTKLLNLLGVIMLGLLLLQFVIGIYKDVFLIKTGQQIDARLILGYY
KHLLKLPQSFFDTMRVGEIISRINDAVKIRTFINGVSLSLTVNVLILLFSFGLMFFYYWK
LALIMLLVIPVYAMIYFIINRLNKKVERKLMEQGAELESQLVESLNAVSTIKRFGLEDFA
NIKTETKFINLLKIGYKSALNSVFSGTSSSFVAQLFTIILLWTGSYFVIDREITAGELLS
FYAIIGYFTGPAASLIGANKQIQNALIAADRLFEIMDLERESSENKISLTHEKIGDINFN
NVSFRYGTRVQVFENFNLKISKGEITAIIGESGSGKSTLMALLQNVYKIQKGQISIGGLD
INYIDTNSLRNIISVVPQKIDLFAGNVIENIAVGDFNPNMEHILGICKSIGILDFVENLP
NGFETYLGENGASLSGGQKQRIAIARALYKNPEILILDEATSSLDSKSENYIQKTILSMR
EKHKTVVIIAHRLSTIVNADKIIVLDKGTVVESGTHTDLYKQKGRYYELWQAQSPLL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcttccataaaaataaaacaacacgacattaccgattgtggtgccgcctgccttgcc
tctattgctgcgcactaccatctagagctgcccattgcgcgtattcgtcaatatgcaggc
actgacaaaaaagggactaacgttcttggactcatagaagccgcagaaaaactagggttt
gaggccaaaggggtcaaaggtgttttagacagtctttttaaaattcccaaaccagccatc
gctcatattattgtaaaaaagaaactgcaccattatgtagtcatttatggtgtttccaaa
agccacatcacggttatggatcctggtactggaaagatagacaaaaaaacacatgaggca
tttcttgaagaatggacaggggtactcgtcattttacaacctaatgaaacctttaagaaa
ggaaatgacaaaatctctgtttacaagcgattttggtttttactcaaacctcataaattt
gtgttggcacaagccttttttggcgccatcgtatataccttattggggttttctacttct
atatacattcaaaaaataacggattttgtgctcgtcagtggaaacacaaaattactgaat
ttattgggtgttatcatgttagggttactgctgctccaatttgttattggcatctacaaa
gatgtttttctcatcaaaacaggacaacaaattgacgcccgactcatattaggttactac
aaacaccttctcaaattgccacagtccttttttgataccatgcgtgttggagaaatcatt
tcacggatcaatgatgcagtgaaaattagaacttttatcaatggcgtttccttatccctg
accgtgaatgttctcattctcttattttcatttgggctgatgtttttctattattggaaa
ctagcgcttatcatgttgctcgtcattcctgtatatgcaatgatctattttatcatcaac
cgcttaaacaaaaaagtagaacggaaactaatggaacagggcgcagagttagaaagtcaa
ctcgtggaatcgcttaatgccgtaagtactatcaagcgttttggattggaagactttgct
aatataaaaacggaaaccaagtttatcaatttacttaaaattgggtataaatctgctttg
aactctgtgttttcaggcacaagttcatcatttgtagcgcaactattcactatcattttg
ttatggacaggatcctattttgtaatagacagagaaattacagctggagagttattgtct
ttttatgcgataatcggttacttcacagggcccgcagcaagccttattggagccaataaa
caaattcaaaacgctcttattgctgcagatcgactgtttgaaattatggatttggaacgg
gaaagctcagaaaacaaaatttcgctaacgcatgaaaaaattggggatataaacttcaac
aatgtcagtttcaggtatggaacgagagtacaagtttttgaaaattttaatctcaaaatt
tcaaagggtgaaataaccgcgattataggagaaagtggttctggaaaatcaactcttatg
gcgttactgcaaaacgtttataaaattcaaaaaggacaaattagcatcggaggtttagat
atcaattatatagacacaaacagtttaagaaacatcataagcgtagtacctcaaaaaatt
gatttgtttgccggaaatgtcattgagaatattgccgttggtgactttaacccaaatatg
gaacacatcttaggaatttgtaagtcaatagggattttagattttgttgaaaatcttcca
aatggatttgaaacatatctaggcgagaatggggcctcactttctggcggtcaaaaacaa
cgtatcgctatcgcaagagcattatataaaaatcccgagattttaatcttggacgaagca
acatcttcactagatagcaaatcagaaaattatattcaaaagacaattctatctatgcga
gagaaacacaagacagtggtcattattgcgcaccgattaagtacaattgtgaatgctgac
aaaattattgttttagataaaggaaccgtagttgaaagtggcacacacacagacctgtac
aaacaaaaagggcggtattatgaattgtggcaggcgcaaagcccattgctttaa
DBGET
integrated database retrieval system
