Formosa sp. Hel1_33_131: FORMB_09180
Help
Entry
FORMB_09180 CDS
T04465
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
for
Formosa sp. Hel1_33_131
Brite
KEGG Orthology (KO) [BR:
for00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
for03016
]
FORMB_09180
Enzymes [BR:
for01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FORMB_09180
Transfer RNA biogenesis [BR:
for03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FORMB_09180
Prokaryotic type
FORMB_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Coilin_N
DUF5381
Motif
Other DBs
NCBI-ProteinID:
AOR27968
UniProt:
A0A1D7XXB7
LinkDB
All DBs
Position
984812..985501
Genome browser
AA seq
229 aa
AA seq
DB search
MKTVQDYLDGQLLLIDKPLEWTSFQVVNKLRWHIRQAFNLKKIKVGHAGTLDPLATGLLV
ICTGKMTKQIDTFQGQIKTYTGTFVLGSTTPSYDLETAIDQEFPTAHITPELIHETTKKF
IGEIDQFPPVFSALKKEGKRLYEFARAGEAVKIDSRKVMINAFEITKIEGLTVDFSVSCS
KGTYIRSLAYDFGKALESGAHLSALRRTKIGDFSVEKAISIDEFISELS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggttcaagattatttagacggacaactattgttgatcgacaaacccttagaa
tggacgtcctttcaagtggttaataaattacgttggcacattcgtcaagctttcaattta
aaaaaaattaaagtaggccatgcagggactttagatccgttagcaaccggactcttagtg
atttgtactggcaaaatgacaaagcaaatcgacacttttcaagggcaaatcaaaacctat
acgggcacatttgttttgggcagtactacgccttcctatgatcttgaaacagcaatcgat
caggagtttccaacagcacatattacgcctgaattaattcatgaaaccaccaaaaaattt
ataggggagattgatcaatttccacctgttttttctgccttaaaaaaagaaggcaaacgt
ttgtacgaatttgcgcgcgctggagaagctgtgaaaattgactctcgaaaagttatgatt
aatgcgtttgaaattacaaaaatagagggcctaacagtggactttagcgtcagctgtagc
aaaggaacttacatccgttcattggcctatgactttgggaaagcactggaatcaggggca
catttatctgcacttcgtcgtactaaaatcggagacttctccgtagaaaaagccatttca
attgatgaatttatttcagaattgagttaa
DBGET
integrated database retrieval system
