Formosa sp. Hel1_33_131: FORMB_11120
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Entry
FORMB_11120 CDS
T04465
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
for
Formosa sp. Hel1_33_131
Pathway
for02020
Two-component system
for02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
for00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FORMB_11120
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FORMB_11120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
for03021
]
FORMB_11120
Transcription machinery [BR:
for03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FORMB_11120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
AbiTii
MarR
Dam
Motif
Other DBs
NCBI-ProteinID:
AOR28159
LinkDB
All DBs
Position
1193467..1194921
Genome browser
AA seq
484 aa
AA seq
DB search
MLKQYLHYKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALETGKDQEETYEEEF
DSNDNDMDNEQINADDINVDDYLSDDEIPEYRLHANNYSADDEQKTIPFASGTSFTQHLI
DQLNTFPLEETHYQIAEFLIGSIDDSGYIRRPLLDIMDDLAFTQNVYTDEKTIESVLKVV
HLLDPAGVGARNLQECLVLQLHRKTQTPNTELATKIIELGFEQFTKKHYKKLLQKFSITE
VQLKDAILEIERLNPKPGSSFSNNARSVEHVVPDFTIKITEGELELSLNGRNAPELHVSR
PYNEMLKGYKASKEKTKSQKDAVQFIKQKLDAAKWFIDAIKQRQHTLFITMSTIMHYQKD
YFLSGDEQQLKPMILKDIADKIEMDISTVSRVANSKYVDTPYGTKLIKEFFSESMTNDQG
EEVSTREIKSILETVVAEEDKKKPLTDEKLTIILKEKGYPIARRTVAKYREQLDLPVARL
RKEL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcaatacctacattataaattatcacaaaagctgtcgcctcaacagattcag
ttgatgaagctgatacagttgcctacacaagcttttgaacaacgtctcaaacaagagctc
gaagaaaacccagcactcgaaaccggaaaagatcaagaagagacgtatgaagaggagttt
gattccaatgataatgatatggacaatgagcaaatcaacgcagacgatatcaatgtcgat
gactatctgagcgatgacgaaattccagaatacagacttcatgccaataattacagtgcc
gatgatgaacaaaaaacaattccttttgcttctgggacgtcttttacacaacatctaatc
gaccaactgaatacctttccgttagaggaaacacactatcaaatcgctgagtttttaatt
gggagtatcgatgatagcggctacatccgacgtcctttgcttgatattatggatgatttg
gcttttactcaaaacgtatataccgatgaaaaaaccattgagtcggtgctcaaagtggtg
catctgttagaccccgccggcgtgggtgctagaaaccttcaagagtgtttagtgcttcaa
ttgcatcgaaaaacgcaaacgcccaatacagaattagccacgaagatcattgaattggga
tttgaacaatttacaaaaaagcattacaaaaagcttttgcaaaaatttagtattaccgaa
gtgcaacttaaagatgcgattttagaaattgaacgcttgaacccaaaacctgggagttcc
ttttcaaacaacgctcgctctgttgaacatgtcgttccagatttcactattaaaattaca
gaaggtgaattagaactcagtctcaacggtcgaaatgcaccagaattgcacgtttcaaga
ccgtataacgaaatgctaaaaggttacaaggcttctaaagaaaaaacaaagtcacagaaa
gatgcggtacagtttatcaaacaaaaactagatgctgccaaatggtttattgacgctata
aaacaacgtcaacacaccttgtttatcactatgagtaccatcatgcattatcaaaaagat
tattttttatcaggtgatgagcaacaactaaagcccatgattttgaaagatattgcagac
aaaattgagatggatatttcgaccgtgtctcgcgttgcaaatagcaaatatgtggacact
ccttatggcacaaagttgattaaagaattttttagtgagtccatgaccaatgatcaagga
gaagaagtttcgacccgagaaattaaaagcatcttggaaactgtggttgctgaagaagac
aagaaaaaaccactgacagatgaaaaattaacaattattttaaaagaaaaagggtaccca
atagcccgaagaaccgtggctaaataccgcgaacaattagaccttcctgtcgcacgactt
cgcaaggaactttaa
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