Formosa sp. Hel1_33_131: FORMB_16320
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Entry
FORMB_16320 CDS
T04465
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
for
Formosa sp. Hel1_33_131
Pathway
for03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
for00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FORMB_16320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
for03019
]
FORMB_16320
03110 Chaperones and folding catalysts [BR:
for03110
]
FORMB_16320
03029 Mitochondrial biogenesis [BR:
for03029
]
FORMB_16320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
for04147
]
FORMB_16320
Enzymes [BR:
for01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FORMB_16320
Messenger RNA biogenesis [BR:
for03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FORMB_16320
Chaperones and folding catalysts [BR:
for03110
]
Heat shock proteins
HSP60 / Chaperonin
FORMB_16320
Mitochondrial biogenesis [BR:
for03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FORMB_16320
Exosome [BR:
for04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FORMB_16320
Exosomal proteins of other body fluids (saliva and urine)
FORMB_16320
Exosomal proteins of breast cancer cells
FORMB_16320
Exosomal proteins of colorectal cancer cells
FORMB_16320
Exosomal proteins of bladder cancer cells
FORMB_16320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
REF
Motif
Other DBs
NCBI-ProteinID:
AOR28672
LinkDB
All DBs
Position
complement(1736215..1737843)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIDARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGAPQVTKDGVSVAKEVE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVTSIITDLEKQAKKVGNSSEKIQQIASVSANNDNTIGELIALAFGKVGKEGVITVEEA
KGMDTYVDVVEGMQFDRGYLSPYFVTDADKMIADLENPYILLFDKKISNLQEVLPILEPV
AQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENADLSMLGTAETVTIDKDNSTIVNGAGKADDIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEIEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAQKTLEKLTAANLDEVTGIQIVSKAIEAPLRTIVENAGGEGSVVINKILEGKGDFGYDA
KNDVYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDAAAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatatagatgcacgtgacggattgaaacgtggcgttgat
gcactcgcaaatgcagtaaaagtaactttaggacctaaaggtcgtaatgtgattattggc
aaaagttttggtgcaccacaagtgactaaagatggtgtttcagtagcaaaagaagttgaa
ttggaagatgctctagaaaatatgggtgctcaaatggttaaagaagttgcttctaaaacc
aacgatttagctggagatggtaccacaacagcaaccgttttagcacaagcaattgtaaaa
gaaggtttgaaaaatgtagctgctggtgcgaatccaatggatttgaaacgtggaattgat
aaagcagtcacatccatcatcacggatttagaaaagcaagcaaagaaagttggaaattct
tctgagaaaattcaacaaattgcatctgtttctgccaataacgataatactatcggagaa
cttattgccttggcatttgggaaagttggtaaagaaggtgtcatcacagtagaggaagcc
aaaggaatggacacttatgtagatgtggttgaaggaatgcaatttgacagagggtattta
agtccttattttgtgaccgatgccgataaaatgattgctgatttagaaaatccttatatt
ttattatttgataaaaagatttcaaaccttcaggaagtgcttccaattttggagcctgta
gcacaatctggacgtccacttttaattattgctgaagatgtagatggccaagccttagct
actttagtggtcaataaattaagaggtggtcttaaaatcgctgcagtgaaagcacctgga
tttggagaccgtcgtaaagcaatgctcgaagatatcgccatccttacaggtggtaccgtg
atttcagaagaacgtggattttctttagagaatgcagacttaagtatgttaggaactgcc
gaaacagtgactattgacaaagacaattcaacgattgtcaatggagctggaaaagcggat
gatatcaaggcgcgtgtgaatcaaatcaaggcgcagatagaaacaacgactagcgactat
gacaaagagaaactacaagaacgcttggcgaagttagctgggggtgttgcagtcctttat
gtaggcgctgctagtgagattgaaatgaaagaaaagaaagaccgcgtagatgatgcactt
catgcgacgagagccgctgttgaagaaggcattgttgctggtggaggtgttgcgcttgta
agagctcaaaaaacactcgaaaaactaaccgcagccaatttggatgaagttaccggaatt
caaatcgtgtctaaagcgattgaagctcccttacgtaccattgtagaaaatgctggtggc
gaaggaagtgtagtgatcaataaaatcctagaaggtaaaggcgattttggttacgatgcc
aaaaatgatgtctatgtagacatgcttaaagctggaattattgatcctaaaaaagtaacg
cgtgtggctttggaaaatgctgcttctgtagcaggtatgatcctcacaacagaatgtgct
ttaattgacattaaagaagacgctgctgcaatgcctcctatgggtggcgggatgccaggg
atgatgtaa
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