Formosa sp. Hel1_33_131: FORMB_21710
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Entry
FORMB_21710 CDS
T04465
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
for
Formosa sp. Hel1_33_131
Pathway
for03030
DNA replication
for03430
Mismatch repair
for03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
for00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FORMB_21710
03430 Mismatch repair
FORMB_21710
03440 Homologous recombination
FORMB_21710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
for03032
]
FORMB_21710
03400 DNA repair and recombination proteins [BR:
for03400
]
FORMB_21710
Enzymes [BR:
for01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FORMB_21710
DNA replication proteins [BR:
for03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FORMB_21710
DNA repair and recombination proteins [BR:
for03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FORMB_21710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
GIY_YIG_2
DUF7508
T5orf172
Motif
Other DBs
NCBI-ProteinID:
AOR29194
LinkDB
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Position
complement(2242142..2243392)
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AA seq
416 aa
AA seq
DB search
MNPERDIQPFVVNLTGINSKMLRSAPKFYEVAKRIVEITKDCILVAHNAQFDYRILKTEF
RRLGFDFERENLCTVELSKQLIPDLPSYSLGKLVRSLGIPVSDRHRAAGDATATVKLFKM
LLDKDVEKTIIKAAIRLDPKHQMEPKLTDIISKLPSVTGVYYVHQADGEIVYIGKSKNIK
SRINQHFTGQTPKSKKIQLAVATVTYDETGSELVALLKESEEIKRNKPKFNRALRRTIFT
HGLFSFRDAEGYINLKVEKIKGNQKPITTFSNHDSGKSFMTKIVEQNQLCQKLCGLYKTA
NSCFGYDIKSCAGACISEEPAEAYNKRVLNLIESHTFKDQNMILIDDGREVDERSAILIE
NGVFRGYAYYNLNFQIHTTAVLKSILTPMEHNKDAQHIIQSFMRRHKRLKIIKLQD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccccgaacgcgacatccaaccgtttgtggtgaatctgacgggaatcaacagtaaa
atgctgcgctctgctcccaagttttacgaagttgccaaacggattgtagaaattactaag
gattgtattttggtcgctcacaatgcccagtttgattatcgaattttaaagacggagttt
agacgtcttggttttgattttgaacgcgaaaatttatgtacggttgagctttctaaacaa
ctaattcctgaccttccctcctacagcttgggaaaactcgtgcggtctttaggcattccc
gtgagcgatcggcaccgtgctgcgggcgatgcaacagcaaccgtcaaactgtttaagatg
ctactggacaaggatgttgagaaaactattatcaaagccgccattcgtctggatccaaaa
catcagatggaaccgaaattaaccgatatcatttctaaattaccatccgttactggcgtg
tattatgtgcatcaagccgatggtgagattgtatatattggcaaaagtaaaaatattaaa
agtagaatcaatcagcattttacaggccagacaccgaaatcaaaaaaaattcagctcgca
gtcgccacagttacttatgatgaaacgggcagtgaattggttgccttgctcaaagaaagt
gaagaaataaaacgcaacaagcccaaattcaatcgggcacttcgacgtaccatttttacc
catggattgtttagttttagagatgctgagggctatatcaatttaaaagtagagaaaata
aaagggaatcaaaaacccatcaccaccttctcaaatcatgacagtggaaaaagttttatg
actaaaattgtagaacaaaatcaattgtgtcaaaaactttgtgggctctataaaactgcc
aattcctgttttggatacgatattaaaagttgtgctggcgcctgtatttcagaagagccc
gccgaggcttacaataaaagagtgttaaaccttattgaatcccatacctttaaggatcaa
aacatgattctcatcgatgatggtcgtgaagtggatgaacgcagtgcaatcctgattgaa
aacggtgtttttagaggatatgcctactataatttaaactttcaaattcatacgaccgcg
gtgttaaaatcgattttaactccgatggaacacaataaagatgcgcagcatatcattcaa
agttttatgcgccgtcacaaaagattaaaaataattaaacttcaagactaa
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