KEGG   Formosa sp. Hel1_33_131: FORMB_22710
Entry
FORMB_22710       CDS       T04465                                 
Name
(GenBank) helicase UvrD
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
for  Formosa sp. Hel1_33_131
Brite
KEGG Orthology (KO) [BR:for00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:for03400]
    FORMB_22710
Enzymes [BR:for01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FORMB_22710
DNA repair and recombination proteins [BR:for03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FORMB_22710
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 Zn_Ribbon_1 Zn_ribbon_15 DUF7575 DZR AAA_14 DEAD AAA_11 Zn_ribbon_3 GpA_ATPase zf-C3HC4_3
Other DBs
NCBI-ProteinID: AOR29289
UniProt: A0A1D7Y1K5
LinkDB
Position
complement(2348905..2351058)
AA seq 717 aa
MTETKTDLSGLNEKQRQAVVSECKRLLVLAGAGSGKTKTLLQKLIYLIEEKGVNPSNILA
ITFTKNAANEMLDRLIISADDTEEYVEILANKNRTAKEKDTERYFFTKKYKWIDNLTLKT
FHSLCYGIIRNFGVNEFDNKFKIIGDTKATDDEFAKYSATETAFEVIHKILIENCESNEY
LLNLKRYILDYMIDKIHIEKDKRLSLPKDGKFYTTLNGTKVRSKSEQYIADWLYRHSIKF
EYEPNVNFRDFDFRPDFFIPEANLYLEHVSQKSYPTKGKEQQFNKANKLLVKTFEHQTKD
TALFNLVLERIVKNRLPSNYHFSTALSFEEEFNSYHKEVKDFLRQTMRVIDMIKVENIPT
KMVLEQSQKDQHERVRDFYKLAIPAIEQYQSYCTNKSYLDFNDMITKTISLFKNHNEIAD
KFRGKYEYILVDEFQDVNNLQVELIKLLLTAKNQLFCVGDDWQSIYGFRGSNVDYIVNFK
KHFKDSETIKLSMNYRSTEHIVGASNEVIKHNKFKVNKNVQSNKKSSSKIHIYSGKNEAE
NIEYVLDQVHKLKEKGYTKEDILFLYRRSKMYSPYFERFKQERVFVSGKTIHASKGLEAK
AVFIIGLTEGGGGFPDIWMEDRIYQVIKESNHDLLLEEERRLFYVAITRAKDDLFLITEK
GNESSFLKEIPDNFTFKTSIPFKSVIEEITLCSKCSNRLDEGFAFCPYCGDEQKLNE
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgacggaaaccaaaactgatttaagtggactgaatgaaaaacagagacaagctgtagtt
tctgaatgtaaaagacttcttgtacttgcaggagcaggttcgggaaaaacgaaaacctta
cttcaaaagctaatttatctcattgaagaaaagggagtaaatccaagcaacattttggca
atcacttttactaaaaatgccgctaatgaaatgcttgataggcttattatttcagcagat
gatacagaagaatatgtcgaaattttagcaaacaaaaatcgaactgcaaaagaaaaagat
acagaacgatactttttcaccaagaagtacaaatggattgataacctaacgctcaagact
tttcatagtctttgctacggcattatccgaaattttggagtaaatgaatttgacaacaaa
ttcaaaattattggagatacaaaagctacagatgatgaatttgcaaagtattcggctacc
gaaacagcttttgaagtcattcataaaattctaatcgaaaactgcgaatccaacgagtat
ctgctcaacttgaaaagatacattttggattatatgattgataaaatccacattgaaaaa
gacaaacgtctttccttacctaaggacggtaaattttacacaacattaaacggaactaag
gttcgttcaaaatctgaacaatatattgctgattggctttatcgccacagtatcaagttc
gagtatgaacctaatgtgaatttcagagattttgattttagaccagattttttcattcca
gaagccaatctgtacttagaacacgtaagccaaaaaagttatccaactaaaggcaaagaa
caacagtttaacaaagcaaacaaactacttgtaaaaacatttgagcaccaaacaaaagat
acagcgctgtttaatttggttttagagcgaattgtaaaaaatagacttccttcaaattac
cacttctctactgccctgtcttttgaggaggaatttaactcttaccacaaagaagtaaaa
gactttttacgccaaactatgcgtgtaattgatatgataaaagtggagaatataccaaca
aaaatggttttagaacaatcacaaaaagaccaacacgaacgagttagagatttttacaaa
cttgccattcctgcaatagaacaatatcaatcgtattgcaccaacaaatcatatctcgac
ttcaacgatatgattacaaagaccatttcgctatttaaaaatcataatgaaatagcagat
aagttcagaggtaaatatgaatatattctagtagatgaatttcaagatgtaaacaacctg
caagtggaattaattaaacttctgttgacagctaaaaaccaacttttctgcgttggagat
gattggcaaagcatatatggattcagaggttcaaatgtagattacattgtaaatttcaag
aagcattttaaggattccgaaactataaaattgagtatgaattacagaagcaccgaacat
attgttggtgcaagtaatgaagtaatcaagcataacaaattcaaggtaaataaaaatgtt
cagtccaataaaaagtcaagtagcaagattcacatatattcagggaaaaatgaagctgaa
aacattgaatatgtgcttgaccaagtacacaagctaaaagaaaaaggctacacgaaagag
gatattctatttctctatcgcagaagtaaaatgtacagtccatattttgaaagattcaaa
caagaacgagtatttgtttcaggcaaaacaattcacgcttcaaaaggacttgaagcaaaa
gcagtctttattatcggtttgacagaaggaggtggaggatttcctgacatttggatggag
gacagaatttatcaagttatcaaagaatcgaatcacgacctgttacttgaagaagaaaga
cgacttttttatgtagcaatcacaagagcaaaagacgacctgtttcttattacagaaaaa
ggaaatgaatcgagttttctaaaagagattccagataattttactttcaagactagtatt
ccatttaagtctgtaattgaggaaataacgctttgctcaaaatgtagcaaccgcttggac
gaaggcttcgctttctgtccatattgcggagacgaacaaaaactaaatgaataa

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