Formosa sp. Hel1_33_131: FORMB_22790
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Entry
FORMB_22790 CDS
T04465
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
for
Formosa sp. Hel1_33_131
Pathway
for03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
for00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FORMB_22790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
for03400
]
FORMB_22790
Enzymes [BR:
for01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FORMB_22790
DNA repair and recombination proteins [BR:
for03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FORMB_22790
Prokaryotic type
FORMB_22790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOR29297
UniProt:
A0A1D7Y136
LinkDB
All DBs
Position
2357242..2357907
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AA seq
221 aa
AA seq
DB search
MLQLSGTWRSHLEPEFKKPYFETLDVFVHAEYGLHPCYPPFNQIFNAFESCAFEAVKVVI
IGQDPYHGEGQANGLCFSVNEGMPHPPSLKNIFKELETDLKLPVPSSGDLSPWANQGVLL
LNATLSVRAKEAGSHQKHGWEKFTNEVIKTLSRERSDLVFLLWGSFAKNKIRFIDTEKHT
VLQTGHPSPLSANRGYWFGNKHFSKTNEVLKSLGKSPIQWG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttacaactcagcgggacttggcgttcccatttagaaccagaatttaagaaaccttac
ttcgagacattggatgtttttgtgcatgccgaatatggtttacacccctgttatccccct
tttaatcagatttttaatgcgtttgaaagctgtgcgtttgaagcggttaaggttgtcatc
atcggtcaggatccctaccatggtgaaggacaggccaacggtttgtgtttttctgtgaat
gaaggaatgccgcatccaccttctttaaaaaatattttcaaggaattagaaacggatttg
aaacttccagttccgtctagtggcgatttaagtccgtgggcaaaccaaggcgtgttactt
ttaaatgcaaccttgagtgtccgtgcaaaggaagcggggagtcatcaaaaacacgggtgg
gaaaaattcacaaatgaggtgatcaaaacactttctagggaacgatcggatttggtattt
ttattatggggaagttttgctaaaaataaaattagatttatcgatacagaaaaacatact
gttttacaaacgggacatccatcgcctttgagtgccaatcgtggttattggttcgggaat
aagcattttagtaaaacgaatgaagtgctgaaatcattaggcaaatcgcccattcaatgg
ggttaa
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