Formosa sp. Hel1_33_131: FORMB_24520
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Entry
FORMB_24520 CDS
T04465
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
for
Formosa sp. Hel1_33_131
Brite
KEGG Orthology (KO) [BR:
for00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
for03400
]
FORMB_24520
Enzymes [BR:
for01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FORMB_24520
DNA repair and recombination proteins [BR:
for03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FORMB_24520
Prokaryotic type
FORMB_24520
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOR29469
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Position
complement(2518809..2520116)
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AA seq
435 aa
AA seq
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MKTTVSLFWFRRDLRLHDNHGLFEALKHNEAVLPIFIFDTSILDSLPKNDARVEFIHEQL
QAINTNLQAHGSGLSVYHGTPEAVIEQLTTEYDVSSVYYNRDYEPYALSRDQSISDLLES
KSIAFNSFKDHVIFEQNEITKDDGLPYKVYTPFSKKWLAAFNTDRCSAFHSEELLSNTYQ
SSSFPWVDLKSMGFEPNPVKVAPYKVESGIIENYEATRNFPAVDGTSKLGPHLRFGTVSV
REIVSKAIQHTNNTFLKELIWREFFMQILWHFPHTVTQSFKPQYEAIKWRNDPEEYKQWC
DGNTGYPLVDAGMRELNQTGFMHNRVRMLVGSFLCKHLLIDWRLGEAYFAEKLHDFELSS
NVSNWQWVAGCGVDAAPYFRIFNPTTQVTNFDKEHKYIKKWVPEYQELTYPTPMVDHKFA
RERCLSTYKEALGKN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaactgtatcactattttggtttagaagagatttaagactgcacgacaaccat
ggattgtttgaagccttaaaacataacgaggctgtattgcctatatttatttttgatacc
tctatattagattcattacccaaaaatgatgcaagagttgaattcatccatgaacaactt
caagcaatcaacacaaacctgcaagcacacggaagtgggttgtctgtttaccacggaact
cctgaagcggttatagaacaactgaccactgaatacgacgtaagcagcgtatattacaat
cgagattatgagccgtatgccctttcaagggatcaaagtatttctgacttactagaatca
aaatccatcgcatttaattcgtttaaagaccatgtgatatttgaacaaaatgaaattaca
aaagacgacggacttccttataaagtctatacccctttctcaaaaaaatggctggccgct
tttaataccgatcgttgcagcgcatttcactcagaagaattattaagcaatacttaccaa
tctagttcttttccatgggtggatttaaagtctatgggctttgagccaaaccctgttaaa
gtcgcgccttacaaagtggaaagtggcatcattgaaaattatgaagccacacggaatttt
cctgcggtggatgggacgtccaaattaggccctcatttacgatttggaacggtaagtgtt
cgagagattgtttccaaagccattcagcataccaacaatacgtttttaaaagaattgatt
tggcgtgaattttttatgcagattttatggcattttcctcataccgtcacccaaagtttc
aagcctcaatacgaagcgattaaatggcgtaatgaccccgaagaatacaaacaatggtgt
gatggaaataccggctatccccttgtagatgcggggatgcgtgaactgaatcaaacagga
tttatgcacaaccgtgtgcgtatgttggtgggtagttttttatgcaaacatcttttgatc
gattggcgcttgggagaagcttattttgcggaaaagctccatgattttgaactttcaagt
aatgtgagtaattggcaatgggttgctggctgtggcgtagatgcggcaccgtattttaga
attttcaatcctacgacacaagttaccaattttgacaaagagcataaatacattaaaaaa
tgggtgcctgaatatcaagagttaacctatcctacgccgatggttgatcataaatttgcg
agagagcgttgtctttcgacctataaagaagccttgggtaagaactaa
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