Formosa sp. Hel1_33_131: FORMB_24780
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Entry
FORMB_24780 CDS
T04465
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
for
Formosa sp. Hel1_33_131
Brite
KEGG Orthology (KO) [BR:
for00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
for03009
]
FORMB_24780
Enzymes [BR:
for01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FORMB_24780
Ribosome biogenesis [BR:
for03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FORMB_24780
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AOR29495
LinkDB
All DBs
Position
complement(2550680..2551390)
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AA seq
236 aa
AA seq
DB search
MDKIVSNIDNLQILHEDNHLIVINKRSGDLVQGDKTGDTPLSDIVKGYIKKKYNKPGAVY
LGVTHRLDRPTTGIVVFAKTSKALTRMNALFLNKKINKTYWAVVKNKPSKLKDTLIHWLK
KNPKNNKSKAYIKEVDQSKKAVLHYELIYSLDRYHLLEVNLETGRHHQIRSQLSTVGSPI
KGDLKYGFDRSNPDGSIHLHARNISFTHPVNEQLTSVTAPPPNEVLWKECMNHIDV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgtttcaaatattgacaaccttcaaattcttcatgaagacaatcattta
atagtcatcaataaacgctctggagaccttgttcagggtgataaaactggagacacgcct
ctcagtgatattgtaaaggggtatataaaaaagaagtacaacaaaccaggggctgtttat
ttgggagtcacgcatcggttggaccgccctaccaccggaattgttgtatttgctaaaact
tctaaagcactcacgagaatgaatgcattgtttttgaacaaaaaaataaataaaacttat
tgggctgttgtgaagaataagccctcaaaattaaaagacacactcattcactggcttaag
aaaaatcctaaaaacaacaagtcaaaagcatatattaaagaagttgatcaaagtaaaaag
gcggtactgcattatgaattaatctatagtttggaccgctaccaccttcttgaagtcaat
cttgaaacgggaagacaccaccaaatcagaagtcagttatctactgttggaagtcctatc
aaaggtgatttgaaatatggatttgaccgtagcaaccccgacgggagtatccatttacac
gcccgaaatatttcatttacacatcctgtaaatgagcagttaacatccgttactgcgccc
cctccaaacgaggtattatggaaggaatgtatgaatcacattgatgtataa
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