KEGG   Fusarium oxysporum: FOXG_00093
Entry
FOXG_00093        CDS       T04882                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
fox  Fusarium oxysporum
Pathway
fox03013  Nucleocytoplasmic transport
fox03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOXG_00093
  09122 Translation
   03013 Nucleocytoplasmic transport
    FOXG_00093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fox03019]
    FOXG_00093
   03041 Spliceosome [BR:fox03041]
    FOXG_00093
Messenger RNA biogenesis [BR:fox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     FOXG_00093
Spliceosome [BR:fox03041]
 Complex C
  Other components
   EJC/TREX
    FOXG_00093
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FOXG_00093
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd DSE1_N Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N CFAP251_N Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 WD40_RFWD3 Ras PAC11
Other DBs
NCBI-GeneID: 28942417
NCBI-ProteinID: XP_018231708
LinkDB
Position
1:complement(1900937..1902568)
AA seq 336 aa
MAPVLRARQSLSKDKFSSYFGNLRSQPYNDPNNSRGSNPHSLRCIAWNPLGTLVATGSSE
KTLRVWNPEKPHVKFSTELKGHSASVEKVAFNPTKDAELCSVSSDGVVKFWDVRTKACFN
EVKGLGDAFTLVWAPDGNTLLVGNKADTIFVLSPSQSTPLSTHQQSVQTNQIAFCWSGEK
IFLTTAEGRIRVLSYPGFEPVLQSKHGEETGEFELNGHTSSCLTADLQPTGRYLATGGSD
SVIALWDTTDWICQRTITRMVGPVKSLSFTFDGSFVVGGSDEGSGLEVSHVETGEHVHTF
KTAGACPVVAWAPTRYCLAYSDLGILRIVGVDVDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcaccggtccttcgagcaagacagagcttatcaaaggataagttctctagttacttt
ggcaacctcagaagtcagccctacaacgaccccaataactcgcggggctcgaatccccat
agcttgcgatgcattgcgtggaatccgctcgggactctagtagcaacggggtcgtcagag
aaaaccctcagagtgtggaatcctgaaaagcctcatgtgaagttttcgacggagctcaag
ggccactcggcatctgttgagaaggtcgcattcaacccaacaaaagatgcagagctttgc
agtgtgagcagtgacggcgtggtcaagttctgggacgtgaggacaaaagcatgcttcaac
gaggtcaaaggacttggggacgcttttactcttgtctgggcaccagatgggaacacgctt
ctcgttgggaacaaggcagataccatcttcgttctgtcgccatctcagtcgacgcctctc
agcacgcatcagcagtccgtgcagaccaaccagatcgcattctgctggagcggtgagaag
atcttcctcacgacagcagaaggacgtatccgagtcttgtcgtaccctggatttgaacct
gtattacagagcaaacatggagaagagacgggcgagtttgagctcaatggacatacttct
tcgtgtctgactgctgatctacagcctacggggcggtatctggcaacgggaggctcagac
tcagttattgcgttgtgggatacaacagactggatctgccagcgaacaattacgaggatg
gtcgggccagtgaagagcctcagctttacgttcgatggtagttttgttgtcggtggaagt
gatgaaggatctggcctggaagtatcgcatgtcgagacgggagagcatgtccacacgttc
aagacagcgggtgcttgtccagtagttgcttgggctccaacacggtattgccttgcatat
agtgatttgggcattttgcggatcgtgggcgtcgatgttgacaggaaatag

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