Fusarium oxysporum: FOXG_00178
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Entry
FOXG_00178 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
fox
Fusarium oxysporum
Pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_00178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fox03041
]
FOXG_00178
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FOXG_00178
Spliceosome [BR:
fox03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
FOXG_00178
Complex C
U5 SnRNP specific factors
FOXG_00178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
BRR2_plug
ResIII
Helicase_C
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
28942499
NCBI-ProteinID:
XP_018231875
UniProt:
A0A0J9U4G5
LinkDB
All DBs
Position
1:complement(2172183..2178857)
Genome browser
AA seq
2207 aa
AA seq
DB search
MSDANRDVSQYKYSAMSNLVLQADRRFVTRRTDEATGDPESLAGRLSIRDMGARVARDDA
PKPKKQPGLPEIERGSLREGEDILAREQRRRKAEAPQSTGILGANDLLVEGITYRPRTAA
TRQTFDLIITSVAKTLGDVPHEVVRSAADAVLEYLKDDDLKDLDKKREIDDILGVTLNPK
EFNELVNLGKKITDYDAQDDDEDVAMGGADGEDAEIDERQGVAVAFDEDEEDDEGGLVHE
VRDESSEDEEEEEEEEKEQSAEGKEEDAVADVGDEMILDSAPSGGKQDEKDKHSIPARDI
DTFWLQRQIGTLYPDAHEQSDKTKEALKILSGEPGEDGEEKSLRDVENDLMELFDYEHHE
LVQKLVENREKVFWLTKLARTQTPEERADVEREMVSEGLQWILNELKGKDTAEGKKGKID
IKMDIDVPASFTADGPKAERAEGQLVGGLQPRKLINLDNLVFDQGNHLMTNPKVRLPEGS
TKRTFKGYEEIHIPTPKKRNEPGDVLIPISDMPEWSRNPFSKNQSLNKIQSKCYPSAFDD
DGNMLVCAPTGSGKTNVGMLAILREIGKHRNPETGDIDLDAFKIVCIAPLKALVQEQVGN
LGGRLEPYGIRVAELTGDRQLTKQQIAETQIIVTTPEKWDVITRKSNDLTYTNLVRLIII
DEIHLLHDDRGPVLESIVSRTIRKTEQTGEPVRIIGLSATLPNYKDVASFLRVDTKKGLF
HFDGSFRPCPLRQEFVGVTDRKAIKQLKTMNDVCYNKVIEHVGTNRNQMLIFVHSRKETA
KTARYIRDKALESDTINQILRHDAGSREVLNEASSQATDQDLKDILPYGFGIHHAGMSRA
DRTDVENLFAHGAIQVLVCTATLAWGVNLPAHTVVIKGTQVYSPEKGSWVELSPQDVLQM
LGRAGRPQYDTYGEGIIITTQSEMQYYLSLLNQQLPIESQFVSKLVDNLNAEIVLGNVRT
RDEGVEWLGYTYLFVRMLRSPGLYQVGAEYEDDVALEQKRVDLIHSAAMVLRKSNLIKYD
EKTGKLQSTELGRIASHYYITFGSMETYNNLIQPSITTIELFRVFALSAEFKYIPVRQDE
KLELAKLLGRVPIPVKESIEEPHAKINVLLQAYISRLKLDGLALMADMVYVTQSAGRILR
AIFEIAMKKGWASVAKTALDLCKMAEKRMWPTMSPLRQFPSCPRDVIQKAEKIDVSWSSY
FDLDPPRMGELLGLPRAGRTVCGLVNKFPRVEVQAQVQPMTRSMLRVELSITPNFEWDDS
IHGAAESFWIIVEDCDGEDILYHDTFLLRKEYAESEQNEHIVDFTVPITDPMPPNYFVSV
ISDRWMHAETRLPVPFHKLILPEKFPPHTELLELQPLPVSALKVSSYIDLYPVWKQFNRI
QTQTFNSLYKTDANVFIGAPTGSGKTVCAEFALLRHWTKGDVGRAVYIAPFQELVDSRLQ
DWQKRLSHLNGGKEIVKLTGETATDLKLLEKGDLILATPTQWDVLSRQWKRRKNVQTVEL
FIADEVHLLGISQGYVYETIVSRMHYIRTQTELPLRIVALSVSLANARDIGEWIDAKKHD
IYNFSPHVRPVPLELHLQSFTNTHFPSLMLAMAKPTYLAITQMSPDKPAMIFVPSRKQTR
ATARDLLAAAFADDDEDRFLHAEVEQMKPLLERINEEALAEALSHGVGYYHEALSQSDKR
IVKHLYDNGAIQVLVASRDVCWELNSTAHLVIVMGTQYFEGREHRYVDYPLSEVLHMFGK
ALRPSKDGRGRGFLMLPQVKREYYKKFLNEALPVESHLHNYLHDVFVTEISTKMIESGDD
AINWTTFTYFYRRLLANPSYYSLTSTTHEGLSNYMSDLVETTLRELSESKIIEFDEDDGS
VAPQNAAMIAAYYNISYITMQTFLLSLSARTKLKGIMEIVTSATEFESIQIRRHEDGLLR
RIYDRVPVKMSEPVYDSPHFKSFVLLQSHFSRMQLPIDLAKDQEVLLSRVLSLLSAMVDI
LSSEGHLNAMSAMEMSQMIVQGMWDRDSPLKQIPHFSPEVVKVANEFGIKDIFDFMEAMN
PDENADYNKLVKRLGLSQNQLAQAANFTNDKYPDLELEHEVLDEGEIRAGEPAYLNIKIA
RNLEEEDGDYDSTVHAPFYPSKKMENWWLVVGDEKTKSLLAIKRVTIGRELNVRLEYTVP
SPGEHDLKLFLMSDSYVGVDQEREFSVTAAEGMDVDDDEEDEDEDEE
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcaaatcgagatgtgtcgcagtacaagtactcggccatgtcgaacctggtt
ctccaggccgatcgtcgatttgttacaagacgaaccgacgaggctactggtgatccagag
tcgctggccggtcgcttgagtattcgagatatgggtgctagagttgcacgcgacgacgcg
ccaaaaccgaagaaacagcctggactccccgaaatcgagcgaggcagtctaagagaaggc
gaagatattctggcacgagaacagcgcagacgaaaggcagaggcgcctcaatcgacaggt
atcctcggcgccaacgatcttttggtggaaggcatcacataccgaccacgaaccgcagcg
acgcgacagactttcgatctcatcattacctcggtagcaaaaactctgggcgacgtaccc
cacgaggtcgtacgtagcgcagcggatgccgtcctggaatatttgaaggatgatgatttg
aaagatctggataaaaagagggaaatcgacgacatcttgggtgtgacactaaaccccaag
gaatttaatgagttggtgaacctcggcaagaagatcacagattacgacgcccaggacgac
gatgaggacgttgcgatgggtggcgccgatggtgaggatgctgaaatagatgagcgccag
ggtgtcgcggtcgcgttcgatgaagacgaagaggatgacgaggggggccttgttcatgaa
gtccgtgacgaatcttcagaggacgaagaggaagaggaagaggaagagaaggaacagagt
gctgaaggcaaggaagaagatgctgttgctgacgttggggatgagatgattctcgactcg
gcgccttcaggtggcaaacaagacgagaaagacaagcatagcataccagcccgagacatc
gacacattttggttacaacggcaaatcggcacactataccccgacgctcatgagcaaagc
gacaaaacaaaggaggctctgaagatcctgtcaggagaacctggtgaggatggcgaggaa
aagtccttacgtgatgttgagaacgatctcatggagttgttcgactacgagcaccatgag
ttggttcagaagcttgttgagaacagggagaaggttttctggcttacaaaattagcacga
acacagactcccgaagagcgcgctgacgttgagcgtgaaatggtctcagagggtcttcaa
tggatactcaacgaactcaagggtaaagacactgccgagggtaagaagggcaagattgac
atcaagatggacattgatgtcccagcttcctttaccgcggatggacccaaggctgaacgt
gccgagggccaacttgtcggcgggcttcagcctcgaaagctcatcaacctcgataatctg
gtcttcgatcaaggaaatcaccttatgacaaaccccaaggtccggctaccagaaggctca
accaagaggacattcaagggctatgaagaaattcacatccctactcctaagaaacgcaat
gagcccggcgatgtcttgatacccatttctgatatgccagagtggtcacgaaaccccttc
agtaaaaatcagtccttgaacaagatccagtccaagtgctatccttcagcattcgatgat
gatggaaacatgcttgtttgtgctcctactggtagtggaaaaaccaatgttggtatgctc
gctattctccgggaaattggaaagcatcgcaaccctgagaccggcgatatcgatctagac
gcctttaagatcgtctgtatcgctcctttgaaggctctagttcaagaacaggttggcaat
ctgggtggtaggctcgagccgtatggtattcgagtcgcagaattgacaggtgatcgtcaa
cttaccaagcaacaaatcgccgagacacagatcatcgtcacaacccccgagaaatgggac
gtcatcaccagaaagtccaatgacttgacctacaccaacctcgtgcgcctcatcattatc
gacgaaatccaccttctccacgacgaccgtggccctgtactggaaagcattgttagccga
accatccgcaagactgaacaaactggcgagccagttcgaatcattggtctttctgccacc
ctgcccaactacaaagatgttgcgagcttcttgcgagtggacacgaagaagggtctcttc
cactttgacggatctttccgaccctgccctctgcgacaggagtttgttggtgtcactgac
cgtaaagccatcaagcagctaaagaccatgaacgacgtctgctacaacaaggtgatcgag
catgtgggcacaaaccgtaaccagatgcttatctttgtgcattcccgaaaagagactgcc
aagactgctcgctacatccgcgataaggctcttgagtcagacacaatcaaccagatcctt
cgtcacgatgctggtagccgtgaggtcctcaatgaagcgtcttctcaggcaaccgaccaa
gacctcaaggatattctgccatatggtttcggcatccaccatgctggtatgagccgagct
gacaggacagatgtcgaaaacctttttgcccatggtgctatccaggtcctggtgtgtact
gctacactggcttggggtgtgaacttgcctgcccatacagttgtcatcaagggaacacag
gtttactcccccgagaagggtagctgggttgagctcagccctcaagacgtccttcagatg
cttggacgtgcaggccgaccccaatacgatacttatggagaaggtatcatcattacgaca
cagagtgaaatgcaatactatctctcacttttgaatcagcagcttccgattgagagtcag
tttgtcagcaagctggtggacaacctgaatgccgaaatcgttcttggcaacgtaaggact
cgtgatgagggcgttgagtggttgggctacacatacctctttgtcagaatgcttcgctcg
cctggactttaccaggtgggcgcagagtacgaagatgatgtggctcttgagcagaagcga
gttgatttgattcattctgccgccatggttctgcgaaagtcaaacctcatcaagtatgat
gaaaagactggaaagctccagtcaactgagcttggtcgtatcgcttcgcattattatatc
acattcggttctatggagacttacaacaacctcatccagccttctatcactacgatcgag
ctcttccgtgtcttcgccctcagtgctgaattcaagtatatccctgttcgacaggatgag
aagcttgagttggctaagctgctgggccgagtcccaatccccgtcaaagagagcattgag
gaaccccacgccaagatcaatgtcctcttgcaagcatacatctcgcgcctcaagctcgat
gggctcgcgctcatggccgacatggtgtacgttacgcaatctgctggccgtatcttgcgc
gctatctttgagatcgcaatgaagaaaggctgggcatccgttgcgaagactgctctggac
ctctgtaagatggccgagaagcggatgtggccaacaatgtcacctcttcgacagttcccc
tcttgtcctcgggatgttattcagaaggctgagaaaatcgatgtgtcttggagcagctac
tttgatctggatcctccccgtatgggtgagcttcttggccttcctcgagccggccgtact
gtatgtggcttggtcaacaagttcccgcgagtcgaagtccaggctcaagttcaacctatg
acaagatcgatgctacgtgttgaactgagcatcacacccaattttgagtgggacgattct
atccacggcgccgcagagagcttttggattattgttgaggactgcgatggagaagacata
ctttaccacgacacctttttgttgcgcaaggaatacgccgaatcggagcaaaatgagcac
attgtcgacttcaccgttcctatcacagatccaatgcctccaaactacttcgtttcggtt
atctctgaccgatggatgcatgctgagaccagacttcctgttcctttccataagttgatc
ttgcctgagaagttccctcctcatacagaacttctcgagcttcagcctctccccgtttct
gccctcaaggtgtcaagctacattgatctctatcctgtatggaagcagttcaacagaatc
caaacacagactttcaactcgctgtataagactgatgcgaatgtgtttattggagctccc
acaggtagcggcaagactgtttgtgccgaatttgctcttctaaggcactggacaaagggc
gatgttggtcgtgccgtgtatattgcccccttccaagaactcgttgactctcgcctccaa
gattggcagaagaggctcagccatctcaatggcggcaaagagatagtgaagcttactggt
gagacggcaacagatctcaagctgttggaaaagggcgacttgatcttggcaaccccaact
cagtgggatgtgctgtcaagacaatggaagcgacgcaagaacgttcagacagttgaactg
tttattgctgacgaggtccatctccttggtatttctcaaggttatgtgtacgagacgatc
gtctctcgtatgcattacatccgcacacagacagaattacccctgcgaattgtcgcattg
agtgtatcgctggcgaacgctcgagacattggtgaatggatcgatgcaaagaagcacgac
atctataacttcagtccacatgttcgaccggtccctcttgagcttcacctccagtcattc
acaaatactcatttcccatctctcatgcttgccatggccaagcccacgtatctggccatc
acacaaatgtctcctgacaagcctgccatgatctttgtgcccagccgcaagcagactcgt
gcaactgcccgagatttgttggctgcagcctttgctgacgatgatgaggaccgtttcctt
cacgctgaggtagagcaaatgaagcctctgcttgaacgcatcaacgaggaggctctcgcc
gaagccctctctcacggtgttggctactaccatgaggctcttagccagagtgacaagcga
attgttaagcatctctacgacaatggtgctatccaggtgcttgttgcttcacgcgatgtt
tgctgggagctcaacagcacggctcatctcgttattgttatgggcacacaatactttgaa
ggccgagagcatcgatatgttgactaccctctcagtgaggtgttgcacatgttcggtaaa
gctcttagaccctccaaggacggcagaggccgaggcttccttatgctgccccaagtcaag
cgcgagtactacaagaaattcctaaatgaggcccttcctgttgagtcgcatctgcacaac
tacttgcacgatgtcttcgtgacagagatcagcaccaagatgatcgagtcgggtgacgat
gcgatcaactggactactttcacctacttctatcgaaggctgcttgccaacccaagttat
tatagcttgacaagcacaacgcatgagggcctcagcaactacatgtccgacttggttgag
acgactctccgtgagctcagcgaatccaagatcattgagtttgacgaggatgacggatcc
gtggcacctcaaaacgcagccatgattgcggcatactataacatttcctacatcacgatg
cagactttcctgctctctttgagcgctcgcacgaagctcaaaggtattatggaaatcgtc
acttcagcaacagagttcgagtcgatccagattcgacgtcatgaggatggtctgttgcga
cgcatttacgaccgagtgcctgtcaagatgtctgaaccagtttatgactcccctcatttc
aaatccttcgtcttgctccagtctcacttctcccgcatgcagctgccaattgatcttgca
aaggaccaggaggtcctgctgtcgagggtgttgagccttcttagtgccatggtcgacatt
ctgtcttcggagggacatctcaacgccatgagcgctatggagatgtcacagatgattgtt
cagggaatgtgggatcgggacagccctcttaaacaaattcctcacttctcaccggaggtt
gtcaaggtggcgaatgagtttggaataaaggatatctttgattttatggaagccatgaac
ccggatgagaatgccgattataacaagcttgttaagcgacttggcttgtcacaaaaccaa
ttggcacaggccgcaaacttcacaaacgacaagtatcctgacctggagcttgaacatgag
gttcttgacgagggtgagatcagggcaggtgaaccggcctacctgaacatcaagattgct
cgcaatttggaagaggaggacggcgattatgactctaccgtacacgcaccattctaccca
tccaagaagatggagaactggtggttggttgttggtgatgagaagaccaagagcctcttg
gccatcaagcgagtgacaatcgggcgggaactgaacgttcgcctcgagtacactgtgcca
tcacctggtgagcatgatctgaagctgttcctaatgagtgatagttatgttggagtcgac
caggagcgggagttttcggttacagcagccgagggcatggacgtggatgatgatgaagag
gacgaggacgaagacgaggagtag
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integrated database retrieval system
