Fusarium oxysporum: FOXG_00326
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Entry
FOXG_00326 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_00326
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_00326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_00326
03041 Spliceosome [BR:
fox03041
]
FOXG_00326
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
FOXG_00326
Spliceosome [BR:
fox03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FOXG_00326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
SPATA1_C
YfiO
Casc1_N
KIF21A
DUF3450
Motif
Other DBs
NCBI-GeneID:
28942642
NCBI-ProteinID:
XP_018232191
UniProt:
A0A0J9U7S9
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All DBs
Position
1:2649968..2652881
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AA seq
211 aa
AA seq
DB search
MAIDKIITDPRLCAVLQISDQARDQAGALLSLGEQSCSEGPPSAEAQAEIAKQQKLLFTT
MAHLKGLHRNVCFSARETKSQTAESRQEVDRLHLQLQNLYYEQRHLQGEITACESYDHKY
QQLPLIPVEEFLAQHPEHENDDENTLMVARIDHERSEREALEQQRQELLKRKQKLIADNK
RRKDDLANLDNDLEKFIDAAKPIQKLFEKAP
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgataaaattattaccgacccaaggctttgcgcagtcttgcagatttcagac
caggcacgcgaccaggctggcgcactcctcagtctgggtgaacaatcgtgcagcgaagga
cctccatcagcagaagcgcaagctgaaatcgccaagcagcaaaaactccttttcacaacc
atggcgcatctgaaaggactgcaccgaaacgtctgtttctccgcccgtgagaccaagtcc
cagactgccgagtcgcgtcaagaagtcgaccgcctgcatctccagcttcagaatctgtat
tacgaacaacgacacctccaaggagagattaccgcatgcgaatcatacgaccacaaatac
caacaattgcctcttatccctgtcgaggaattccttgcccaacaccccgaacacgagaat
gacgacgagaatacattgatggttgcgcgcatagatcacgaacggtctgagcgtgaagct
ctggagcaacagcgacaggagctgcttaagcgaaagcagaagctgattgcggacaacaaa
agaaggaaggatgaccttgccaacttggataatgatttggaaaaattcattgatgctgcc
aaaccgattcagaagctgtttgaaaaggcaccctaa
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