Fusarium oxysporum: FOXG_00452
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Entry
FOXG_00452 CDS
T04882
Name
(RefSeq) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
fox
Fusarium oxysporum
Pathway
fox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOXG_00452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_00452
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FOXG_00452
Prokaryotic type
Archaeal type
TFB
FOXG_00452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
RB_B
PAH_ZNF598
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
28942766
NCBI-ProteinID:
XP_018232430
UniProt:
A0A0J9U620
LinkDB
All DBs
Position
1:3043092..3044967
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AA seq
346 aa
AA seq
DB search
MMPPNGSDAPAFEEDLSNILVCPECNISPPHLVEEFSSGDTVCEDCGMVVGSRIIDTRSE
WRTFANDDQGGDDPSRVGGPQDEFVEGQQLATTVAFSETKAHKALSRTQNNTNQDKSQKG
LMQAYKEIVSYCEAINMGTNVSNAAKHIFKLVDKHKFLKGKPQEAVIAGCIFIACRQNNV
PRTFREIFNLTSVSKKEVGRVFKQLQSFLQKLQDQDGEATGLNTVTNYENTSVGAEDLCG
RYVSQLGFTKQNKISKISRSLAERANNISALAGRSPLSVAAACIYMACQIVGESRSSLPI
AKQAGVSDGTVKTAYKHLYAAREQLITKEWFEGGASMEKLTPATAA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccctaacggcagcgatgcgcctgcttttgaggaagacctcagtaacatccta
gtatgccctgagtgcaacatcagcccgccccacctagtcgaggagttctccagcggtgat
acagtatgcgaagactgcggcatggtagtcggctcgagaatcattgatacgaggtcagaa
tggcgaacttttgcaaatgacgaccaaggaggcgacgaccccagccgtgttggtggaccg
caggatgagtttgtcgaaggccagcaactcgcgacgactgtagccttttccgaaaccaag
gcacacaaggctctgtccaggactcaaaacaacaccaaccaagacaagtcacagaagggt
ctcatgcaagcttataaggagattgtttcctactgcgaagctatcaacatgggcacgaac
gtatccaacgctgcaaagcacatcttcaagctcgtggataagcacaagttcctcaaagga
aagccccaagaggccgtcattgcaggctgcatcttcatcgcgtgccggcagaacaacgtg
cctcgaaccttccgtgaaatcttcaacctgactagcgtgagcaagaaggaagtcggtcga
gttttcaagcaacttcagagctttctgcagaagctgcaggaccaagacggcgaagccaca
ggtctcaacacagtcaccaactacgagaacacatcagtgggtgccgaggatctatgcggc
cgttatgtgtctcagcttggcttcacgaaacagaacaaaatctcaaagatctctcgctcc
ttggcagagcgggccaacaatatttcggcactcgcaggacgatcgcctctatccgttgcc
gcagcatgcatctacatggcgtgccagatcgtcggagaatcgcgcagctcactacctata
gccaagcaggcgggtgtcagcgatggtacagtcaagactgcttacaaacacttgtacgct
gcccgcgagcagctcatcacgaaggagtggttcgagggaggggctagcatggagaagctt
acaccggctactgcggcatag
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