Fusarium oxysporum: FOXG_00588
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Entry
FOXG_00588 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
fox
Fusarium oxysporum
Pathway
fox03018
RNA degradation
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_00588
09123 Folding, sorting and degradation
03018 RNA degradation
FOXG_00588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_00588
03041 Spliceosome [BR:
fox03041
]
FOXG_00588
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOXG_00588
mRNA degradation factors
5'-3' decay
Lsm complex
FOXG_00588
Spliceosome [BR:
fox03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FOXG_00588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
28942891
NCBI-ProteinID:
XP_018232701
UniProt:
A0A0J9U981
LinkDB
All DBs
Position
1:3470700..3472891
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AA seq
99 aa
AA seq
DB search
MATLGGYLNKKVLIVTADSRILVGTLAACDQTTNLVLNNAVERIIRTPDDLEPSAQVPLG
LYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGGIKHV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggctacactcggtggatatctcaacaagaaagtcctgattgttacagccgattcgcgt
attcttgtcggaactctggcagcatgcgaccaaacaactaatctggtcttgaacaacgcc
gtggaacgaatcatccgaacgcccgacgatcttgagccttccgctcaggtacctttgggt
ctatacctcgtccgtggcgacaacgtatgctcgattggtctcgtagatgaggcgctcgac
gacagcatcaactggacagaagtcaagggttcagcaatcggcggtataaaacatgtatag
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