Fusarium oxysporum: FOXG_01038
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Entry
FOXG_01038 CDS
T04882
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
fox
Fusarium oxysporum
Pathway
fox03440
Homologous recombination
fox03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOXG_01038
03450 Non-homologous end-joining
FOXG_01038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fox03032
]
FOXG_01038
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_01038
DNA replication proteins [BR:
fox03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
FOXG_01038
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
FOXG_01038
BRCA1-C complex
FOXG_01038
NHEJ (non-homologous end-joining)
MRX complex
FOXG_01038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
AAA_13
CCDC22_CC
AAA_29
AAA_16
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
28943316
NCBI-ProteinID:
XP_018233541
UniProt:
A0A0J9UBN5
LinkDB
All DBs
Position
1:4905096..4909745
Genome browser
AA seq
1307 aa
AA seq
DB search
MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK
GGAFIHDPKLCGEKEVMAQVKLQFRSINDRQHVATRSLQLTVKKTTRSQKTLDCSLVVVN
NGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEPAALKKRFDEIFEA
MKYTKAIDNLKVLRKKQVEQLGKLQNDEAHNKVNKDRGDRAEKRMKALQAEIEGSRETCE
SISSEMEETQDKIRNIRETANSHLAIVQNLNTKREQLEYREEAVKELKATIDELPDDDGK
LEGDLAHYEDRMQHLQDEADQNKAQYNELQTELGKSRKELSAKLSEQGKHQSDKDKYERQ
LKIRMETIQEAAQSYGFSGFDGDLSDHHVKSFNDRLQKLLSEKKRDLERLQKENSAELDR
ATGVITELEGRKAARIQDRVSAKQRMGAIEKRTSVLQNESSQIDVDEGAKAVLDGQMQDL
EIRFHTAQKTFENADWDRQISDENDKLHQLENENDKLGRELVECTRLASERAQLDYRKKE
LGDRKRKLDTLASTWKPKLDKILGSDWQPETLDSKFQALVKDQSKIVSEVQKCREQIRQK
QQKVDFKLRTSKESHEKKSKEAATCQQQVVNALLAVRDNATVEDYKEEIEVTESQVEELR
NDLSLFDALVDYYTKCKRLLDTKRKCLLCDRHFDDNQAASMERLSKRIDKHLDPKGKVDT
EKDLKDTVANLEKLRSVRGSYDTYERLTAELPSLREECKVAEAEFDALERQVEEQGSVVS
AEEEKQKDLEDMSKTVLSIAQTVKDIAESENQVDRIMSQQMSGGVTRSPDEIHELQAGLS
DQMRNLKNRIVKLTTDRQRTKDQLNSLELEKSELRNKISRAAGQLDKKQDLQNQIQALKE
EASHQRDVIQRADEELETIEPSITEARSARDEVLRRGRAKEQVIADARDAVANSVNEMKM
MDADIQDYIDRGGPSNLASNERSIATLEKTIASTEKEVTDLTVRTNKLKQDIDNGDRKKK
NIKDNLNYRKNLRTIDVIRQEIAELEDRNADEDYERLQAEARMQENHYNRLLAERGSVMG
SMKTKDEELGRLLQEWEMDYKDAKRKYRESHIRVETTKAAIEDLAQCSSAVDKAVMQFHS
MKMAEVNRIAGELWQSTYQGTDIDTILIRSDNESNTGKRSYNYRLCMVKQDTEMDMRGRC
SAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHMIIKARQAQSN
FQLIVITHDEDFLRHMRCSDFCDSFFRVKRDERQNSVISRESITKIF
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatcgacaagctttcgatctcgggtgtgcggtccttcagcccctcagtccgt
gaagctatccagttcaatacgcctcttactcttattgtcggctacaatggatcgggaaag
acaacaatcattgagtgtctaaaatatgccacgaccggcgagctgccgcctaacagcaag
ggcggcgctttcattcatgatccaaagctttgcggtgagaaggaggttatggcccaggtc
aaactccaatttcgatcgatcaatgaccgtcaacatgtcgctactcgaagtttacaactt
accgtcaagaagacaacccgctctcagaaaaccctagactgctccctggttgtagtcaac
aatggagagcgaacaacaacttctactcggcaagctcagctagatgaaatgatcccagag
cgtctcggtgtttctcctgcaattcttgatgctgtcattttctgccaccaagacgaatcc
ctctggccattgagtgagccggctgctttgaagaaacgatttgacgagatatttgaggcc
atgaaatatacgaaagccatcgacaacctcaaggtcctccgaaagaaacaagtcgagcag
ctcggtaagcttcagaatgacgaggctcataacaaggtgaacaaggatcgtggtgacagg
gccgagaagaggatgaaggccctacaagccgaaattgagggatctcgagaaacttgtgag
tcgatcagttctgaaatggaggaaacgcaagacaagatccgaaacatccgagaaacggcg
aacagccaccttgcaattgtgcagaaccttaacaccaagcgtgagcagcttgagtacaga
gaagaggctgtcaaagaattgaaggccactatcgatgaattgcccgatgacgacggaaag
ctcgagggtgacctagcacattatgaagaccgtatgcagcatcttcaggatgaggccgac
cagaacaaagcacagtataatgaattgcagaccgagttaggaaaatcacgaaaggaactt
tctgccaagctttccgaacagggcaaacaccaatcggacaaagacaagtacgagcgtcaa
ttgaagatacgcatggaaaccattcaggaagccgcccagtcttacggcttctcgggcttt
gacggcgatctttcggatcaccatgtgaaatcctttaatgacagacttcaaaaacttttg
agcgagaagaaacgggacctggagcgcttgcagaaggaaaactccgctgagctcgaccgg
gccactggcgtcatcactgagcttgaaggccgcaaagctgctcgcatacaagaccgcgtg
tccgcgaagcaacgaatgggcgctattgaaaaacgcacttcggtactccagaacgagtca
agtcagatagacgtggacgagggtgccaaggctgtacttgatgggcagatgcaagatctt
gaaattagatttcacacagcccagaagaccttcgagaacgccgattgggaccgccaaatc
tctgacgagaacgataagctgcatcagcttgagaatgagaacgataagctaggccgggag
cttgtagaatgtactcgtctagcgtctgagcgagcccaacttgactacaggaagaaggaa
cttggtgaccgcaagcgcaagcttgataccctggcaagcacctggaagccgaagctcgac
aagattcttggcagtgattggcagccggagacactcgattccaagttccaggcattggtt
aaggaccagagcaagattgtcagtgaggtacagaagtgtcgtgaacaaatccgccaaaaa
cagcagaaagtggatttcaaattgaggacttctaaggagtcccatgagaagaaatccaag
gaggcggctacttgccaacagcaggttgtcaatgctcttcttgccgttcgcgacaatgct
accgttgaggattacaaagaagaaatcgaggtcactgagtcacaggtggaggagctcagg
aatgacttgagcctctttgacgctctcgtggattattacacaaaatgcaagcgcttgctt
gatactaaacgcaagtgcttactatgtgatcgccattttgatgacaaccaagctgcaagc
atggagcgcttgagcaagaggatcgacaagcaccttgaccccaaaggcaaagttgataca
gagaaggacctcaaggacaccgtcgcgaacttagaaaagctacgatctgtcaggggatct
tatgatacgtatgagcggttgactgccgaactgcctagtcttcgagaagagtgcaaggtt
gccgaagcagagtttgatgcccttgagagacaagtggaagaacagggatccgtcgtgtcg
gctgaggaagagaagcagaaagacttggaagatatgtcgaagacggtcctcagcattgca
caaactgtcaaggatattgcagagtccgagaaccaggttgaccgtatcatgtctcagcaa
atgtcaggtggggtcactcgaagtcccgacgagattcatgagcttcaagctggcctatcg
gaccagatgaggaacctgaaaaatcgcatcgtgaagttgactacggatcgccagcgcaca
aaagaccagctcaactctcttgagcttgaaaagagcgagttaagaaacaagatcagccga
gcagcgggtcaattagacaaaaagcaggacctccagaatcagatccaggcactgaaagaa
gaggcctcgcatcaacgagacgtcatccagcgagctgatgaggagttggagaccattgag
cccagcattactgaagcaaggtctgcccgtgatgaagtcctaagacgtggccgggccaag
gagcaagtcattgctgacgcccgtgatgccgtagccaactctgtcaacgagatgaaaatg
atggatgctgatattcaagattatatcgaccggggcggaccctctaatcttgcatctaat
gaacgatccattgccacacttgagaagacaattgcgagtactgaaaaggaggtcacagac
cttactgttcgtacgaacaagctcaagcaggacattgacaatggagaccgtaagaagaaa
aacatcaaagacaacctgaactaccgcaagaaccttcgcacgatcgacgttatccgtcaa
gagatcgctgagttggaagaccgcaatgcagatgaggattacgaacgcctccaggctgaa
gctcgcatgcaagagaaccactataatcggcttcttgctgagcgaggctccgttatggga
tctatgaaaactaaagatgaagagcttgggaggctccttcaagagtgggaaatggactac
aaggacgccaagagaaagtatcgcgagtcgcacattcgcgtggaaacgaccaaggctgct
attgaagatttggcgcagtgtagctcggccgtggacaaagctgtgatgcaatttcactcc
atgaagatggccgaagtgaatcgcattgctggcgaattgtggcagagcacctaccaagga
accgacattgatactattctcatccgctcagacaatgagtcaaacacaggcaaacgcagc
tacaactaccgactctgcatggtgaagcaagacactgagatggacatgcgtggtcgatgt
tctgctggacaaaaggttctcgcgtctatcatcattcgcctagctctggctgagtctttc
ggcgtcaactgtggccttatcgcactcgatgagcccaccacaaacttggatcgcgacaat
atcaagagtctggcggagagtctccatatgatcatcaaagcccgacaggcacagagcaat
ttccagcttattgtgattactcatgacgaggactttttgcgacatatgaggtgtagtgat
ttctgtgacagtttcttcagagtcaagcgagatgaacgacaaaatagtgtcatctcgagg
gaaagcatcacaaagatcttctaa
DBGET
integrated database retrieval system
