Fusarium oxysporum: FOXG_01196
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Entry
FOXG_01196 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
fox
Fusarium oxysporum
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fox03009
]
FOXG_01196
Ribosome biogenesis [BR:
fox03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
FOXG_01196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
NBCH_WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
ANAPC4_WD40
WDR54
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
28943467
NCBI-ProteinID:
XP_018233807
UniProt:
A0A0J9UAB8
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Position
1:5372268..5374440
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AA seq
428 aa
AA seq
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MLTQEFVSTICGPPLAANTAISKDVGIYSHSLTPSHTIKASFKKSSTPVNGLAVSESHIF
AAQDQKAHVHVYSRIRGNQEALVPFPERIRSLALAGQVLVVGSTEGRLFLWETCTGRLVS
TPPCHVQAVSCLAVTPYHILSGSDDSNINVWSISRLLELDAQVEQEPDLTLSNHRGAITS
LTVGLGTNPETSICVSASKDKTCIIWNYQTGQLLRTLLFPAFPLCARLDPSARALFVSSE
AGAVYLVELFGGDKPLLGSRSTELPSIVVQINTPLAVSDPEVGQPSCLALTYDGTSILSG
HTKGKILRWSLAENGHPTDVANLNASVTNLCFIPPLSTEQPTKTVSIVKPNQSLKRYNFT
AQLTTDLGEHTKLDQLLETNGFPSETLETAISSVTNPPEAQQDDELARQDAQFRAIINSC
NLLQDPIS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccaagagttcgtttcgaccatctgcggtcctcctctcgcagccaacacagcc
atttccaaggacgttggcatctactctcattcccttacaccatcccacaccatcaaggca
tctttcaagaagagctctacccctgtcaacggtctagccgtcagtgagtctcatattttt
gcggcacaagaccaaaaggcacatgtccacgtctactcgcgtatacgcggcaaccaggag
gctctcgtgccgttccctgagaggatccgcagcttggcccttgctggtcaagttttagtc
gtgggctctaccgagggcagactatttctctgggagacgtgtacaggccggctagtgtcg
acaccaccttgccatgttcaagccgtttcttgcttggccgtgacgccataccacattcta
tccggttctgatgactcaaacattaacgtttggtcaatatcacgactcctggagctcgat
gctcaggtggaacaagagcctgatctaaccctctccaaccatcgtggtgctatcacaagt
ctaactgtcggtcttggtaccaacccggaaactagcatatgcgtgtccgccagtaaggac
aagacatgcatcatctggaactaccagaccggccagcttctccgtacactgctcttccca
gccttccctctctgcgcccgtctggacccaagtgccagggcactcttcgtatcttctgag
gccggtgctgtctaccttgtcgagctatttggtggcgacaagccgttgcttggttcccgc
agcacagagctgccgtctattgtcgtgcaaatcaacaccccgcttgctgtttcggatcca
gaagttggacagccatcatgccttgctctgacatatgacggcacttcgatattgtccgga
cacaccaagggcaagattctacggtggagtctggccgaaaacggccatcctacagacgtt
gcgaatctaaatgcttctgtcaccaacctgtgtttcatacctccgctatcaactgagcaa
ccaacaaagacggtatccattgtgaaaccaaaccagagcctaaagcggtacaactttacg
gcccagcttaccacggatctaggggagcatacaaagcttgatcagctgcttgagaccaac
gggttcccatcggaaactcttgagacagcaatttcatctgtaacaaatccaccagaggct
caacaagatgacgaacttgctagacaggacgcacagtttcgggccatcataaacagctgc
aacctactccaagacccgattagttag
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