Fusarium oxysporum: FOXG_01789
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Entry
FOXG_01789 CDS
T04882
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
fox
Fusarium oxysporum
Pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_01789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fox03041
]
FOXG_01789
03032 DNA replication proteins [BR:
fox03032
]
FOXG_01789
Spliceosome [BR:
fox03041
]
Complex A
U1 snRNP components
Sm proteins
FOXG_01789
U2 snRNP components
FOXG_01789
Complex B
U1 snRNP components
FOXG_01789
U4/U6.U5 tri-snRNP components
FOXG_01789
Complex C
U2 snRNP components
FOXG_01789
DNA replication proteins [BR:
fox03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FOXG_01789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
28944030
NCBI-ProteinID:
XP_018234788
UniProt:
A0A0J9UD37
LinkDB
All DBs
Position
5:2161897..2164899
Genome browser
AA seq
118 aa
AA seq
DB search
MSTDPKIQELLSKSRNELTEYEIAQLEEHEFSAGPLSILQTAVRSHVQVLISIRNNRKLL
ARVKAFDRHCNMVLENVKEMWTETPRLANGKKGRPVNKDRFISKMFLRGDSVILVLLS
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggaccccaagattcaggagcttctcagcaagtcgcgtaatgaactcactgag
tacgagattgcccagctagaagaacacgagttctctgccggccctctatctatccttcag
acggccgttcgatcgcacgtgcaagtgctcatctccatccgcaacaaccgtaagctcctt
gcgcgtgtcaaagccttcgatcgccattgcaatatggtgctggagaatgtaaaggagatg
tggacagagacccctcggttagcaaacgggaagaagggtcgcccagtgaacaaggatcga
ttcatcagcaagatgttcctacgaggcgatagcgtcattctggttcttctcagctaa
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