Fusarium oxysporum: FOXG_01869
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Entry
FOXG_01869 CDS
T04882
Name
(RefSeq) Paf1 complex subunit/triple-helical DNA-binding protein Cdp1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
fox
Fusarium oxysporum
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_01869
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
FOXG_01869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_14
TPR_19
TPR_7
TPR_6
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_10
TPR_Slam
ARM_TT21_2nd
ANAPC3
TPR_11
ARM_TT21_N
TPR_9
Motif
Other DBs
NCBI-GeneID:
28944105
NCBI-ProteinID:
XP_018234927
UniProt:
A0A0J9WHJ3
LinkDB
All DBs
Position
5:<2423084..>2426781
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AA seq
1180 aa
AA seq
DB search
MSSSQTAAANGVNGETRSAPVSTRFTDIPSAIDIPVQGDQEDEAVEIDLEDLVDDPTELC
TLFENERAAKTYWMTVALAYAKQHKIDHAIEMLQRGGSAIQSNSSNPRDKVSMICCLCWM
YLWKSREAPRVAPEGTSVSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRA
SLQAPSKTTGGIGSEKHELLKTAVKSFDDALRVSQGKNMLALMGKARALFSMHKYPESLT
IYQDVLQKMPDLVDPDPRIGIGCCFWQLGFKDDAKMAWERCIEINPDSKVANILLGLYYL
DASGHVPVNSDEFLKLYKKAMTEYTQKSFKLDKNLPLTCSTFAGYFLSRKSWDNADKLAH
KAIQYTDVNAIASDGWYMLARKEHYDGDTERATDYYRRADEARGGTETGYLPAKFGVAQL
SVLKNDLGEAKLRLEKMIQQSKNNEAMILLGTLYAEEVFANQVSDSKEDKSAELKKATAL
LEGVRNAWKDPKKALSPDASVLLNLARLYETDHPDKALQCLQQVEQLELDQVPASERPED
STDEAEIKAALRKSLPPQLLNNIGCFHSQAEKHELASDLFEAALGACMKIGEKDPEMDTD
ALVSTISFNLARSYESRGLTDKAVEVYESLLARHDDYTDARARLAYIKLRKNPNKEGPDA
VAKLYQENNTDLEVRALYGWYLGRVGSRKRPANLGEDNEFRHFKHTLQNYDKHDRHALVG
MGNLYLMQAREMRRESDSEKQKRSATYGKAVEFFDKALSLDPKNAYAAQGVAIALVEDKK
DYKAALGIFNKVRETIRDSHLYVNLGHIYAELRQYSKAIEHYEIALSKDGKANDATILAC
LGRTWLNRGRAERDVDAHIKALECAQKALEVAPEQMHYKFNVAFVQIQLVTMVQGLPENK
RSTEQLEKAAEGLEAAIASLDEIAAHPQTPYPKHDVEQRANMARNTLRKQLERAIGKQKE
WEEKNKEKIQAAKELREAELRRREESRQKALEAERERQEKIRKEHGREDKTKAEDRSKGT
GESKPKRSGGKKKKKSDRQDDESEEEEERTKKRRRLTKKESSKFKSAEIVVDSDEENENE
DDELERAERNIDREETPLSEAEEKVAEDDKMEVDDGANQEGEDDDEEEIAPRQQHKRARR
GRVVDSDEEDNEDGDAPAQASGDESRPAADTSMADADEDE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcgcaaacagccgccgcgaacggtgtcaatggcgaaacacggtccgcgccg
gtcagtacccgatttactgacatcccttccgccatcgacatccccgtgcaaggtgaccag
gaagacgaggctgtcgaaatcgaccttgaggacctcgtcgatgaccctaccgaactctgt
accctcttcgagaacgagcgcgctgccaaaacttactggatgaccgtcgctctagcttat
gccaaacaacacaagatcgatcatgccatcgagatgctccagcgaggcggcagcgccatc
caaagtaacagttccaacccgcgcgataaagtcagcatgatctgttgtctatgttggatg
tatctgtggaagagcagagaggctccccgtgtcgcacccgagggcacctctgtgtctgag
gccaagacaaaggagtattatcttcagctcgcgacatcttcccttaacgatgccgctcga
ctcaacccatcgtttcctcctatctttctcgcccgtggtgttctcctccttctacgagcc
tctttgcaggcaccgtccaaaactactggaggcatcggttccgagaagcacgagctcctt
aagactgctgtaaagtccttcgacgatgccctgcgagtctcccagggaaaaaacatgctt
gcactgatgggaaaagctcgtgctttattttcaatgcacaagtaccccgagtcgcttaca
atttaccaggatgttctgcaaaagatgcctgacttggttgacccggatccccgaattggt
attggctgctgtttctggcagcttggcttcaaggacgacgccaagatggcctgggagagg
tgcattgagatcaaccctgattcaaaggttgccaacattctcctcggcctctactacctg
gatgcgagcggtcatgtaccagtaaacagtgacgaattcctgaagctctacaagaaggcc
atgacagaatatacgcagaagtctttcaagctcgacaaaaacctcccccttacctgctcg
acttttgccggttacttcttgtctcgaaagtcgtgggacaatgccgacaagctggcacac
aaagctatccagtacacagacgtcaatgctattgccagtgatggttggtacatgcttgcg
agaaaagagcattatgacggtgatacggagcgtgcgaccgattactatcgccgtgccgat
gaagctcgcggaggtactgagacaggctaccttcctgctaaatttggtgttgctcagctc
tcagttttgaaaaatgacttgggggaagccaagctgcgtttggaaaagatgattcaacag
tccaagaacaatgaagctatgattctcctgggcacactgtacgccgaggaagtcttcgct
aaccaggtcagcgacagcaaggaggacaagtctgctgaactcaagaaagcaaccgctctt
cttgagggtgtacgaaatgcttggaaggacccgaagaaggcattatcgccagatgcctca
gttctcctcaacttggcacgcctgtacgagacagatcaccctgacaaggctctgcaatgc
ttgcaacaagttgagcaactggaattggaccaggtcccggcatctgaacgacctgaagat
agtactgatgaggccgagatcaaggctgcgcttcgcaagtcgctgccccctcaattactt
aacaacatcggctgcttccactcacaagctgagaaacatgagcttgcgagtgacctgttt
gaggccgcgctaggtgcttgcatgaagattggcgagaaggaccctgagatggacacagat
gccttggtatccacaatcagcttcaacttggctcgaagctacgaatctagaggtctcaca
gacaaggctgtcgaggtgtacgaaagtctcttggctcgccacgacgattacacggatgct
cgcgccagacttgcctatatcaaactcaggaagaacccgaacaaggaaggtcccgacgct
gtcgccaagttgtaccaggagaacaataccgacttggaggtccgagccttgtacggctgg
tatctgggccgagttggctcaaggaaacgcccagccaacctcggcgaggataatgagttc
cgccatttcaagcataccctccaaaactatgacaaacatgatagacacgctctcgtgggc
atgggtaatctgtatctcatgcaggcacgagagatgcgccgcgagtcggactcggaaaaa
caaaaacgaagtgctacctacggtaaagctgttgagttttttgacaaggcgctgtcactg
gatccaaaaaacgcttatgctgcgcagggtgtggccattgctcttgtcgaggacaagaag
gattacaaggcggcactgggtattttcaataaggtccgagaaactatcagggactcccac
ctctatgttaacctgggacacatatatgctgagctcagacaatactcaaaggccattgag
cactatgagattgcgctttccaaagatggcaaggccaatgatgcaacaatcctcgcttgt
ttgggccgaacatggttgaatcgtggccgggccgaacgtgatgtggatgcacacattaag
gcacttgagtgtgcgcagaaggctctcgaggttgctcctgaacagatgcattacaagttc
aacgtggctttcgtgcagatccagcttgttacaatggtccaaggattaccagagaacaag
cgttcgacagagcagctcgaaaaggccgctgagggcctcgaggctgcgatcgcgtcattg
gatgagatcgcagcgcatccgcaaaccccttaccccaagcacgatgtcgagcagcgtgcg
aacatggcccgtaacaccttgcgcaaacagcttgaacgagccatcggtaagcagaaagag
tgggaggagaagaataaggagaaaatacaggcagccaaagagctacgagaggccgagctc
cgtcgccgtgaagaaagtcgtcaaaaggctttggaagcagaacgggagcgacaagaaaag
attaggaaggaacacgggagagaagataaaacgaaagcggaagaccgctccaagggcacg
ggagaatcaaagcccaagagatcaggaggaaagaagaagaagaagagtgatcgccaagac
gatgagtctgaggaagaagaggaacgtacaaagaagcgccgtcgtctgacaaagaaggaa
tcatccaagttcaagtcggccgagattgttgttgacagcgatgaagagaacgagaacgaa
gatgatgaactcgagcgtgctgagagaaacatcgatcgcgaagagactcctctatctgag
gctgaggagaaggttgccgaggatgacaagatggaggtcgacgacggcgccaaccaggaa
ggcgaagacgatgacgaggaggaaatcgctccgcgccaacagcacaagcgagcccgtcgt
ggacgtgtcgtcgatagtgacgaggaggacaatgaggatggggatgcacctgcgcaagca
tctggtgatgagtctcgtcctgctgcagataccagcatggccgacgcagacgaagacgag
taa
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integrated database retrieval system
